Gene Information

Name : O3Y_03915 (O3Y_03915)
Accession : YP_005332652.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : accessory colonization factor AcfC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 900410 - 901171 bp
Length : 762 bp
Strand : +
Note : COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain

DNA sequence : 
ATGAAAAGTAAGAATCGATTTTTATTAATTTCTTTACTATCATTTTCTACGAGTGTTTTTGCGGATGTTAATCTTTATGG
ACCTGGTGGTCCACATGTGCCATTGATTAAAGTTGCAGAAAGTTTTGAAAAATCACAATCAAAACGCGTTAATATTACTT
TTGGACCTCAAGCTACTTGGAATGACAAAGCAAAAAAAAATGCTGATATTTTATTCGGTGCATCAGAACATTCTGCTCTA
GCTATTGCAGAAGGACATAGTGAAAGATTTTCAAAATTTAATATTCATCCTGTATTCATGCGTGAAGCAATTATCTTAGT
AAAAAAAGGTAATCCGAAAAATATTAAGGGTATGGCTGATCTTTTGAAGCCTGGTATCGGAATCGTCGTAAATGATGGAG
CAGGTGTAAGTAATACATCGGGCACTGCTGTTTGGGAAGATTCAGTTGGTAGAATGAAAAATGTTGAGAAACTCCAGGCA
TTTAGATCTAATATTCACGTTTTTGCCCCAAATAGTGGATCAGCGCGTAAGGCGTTTGTTGATGGTGAAGATATTGATGC
ATGGATTACATGGGTCGATTGGGCCATAGCTAATCCAACAATCGGCGATATGGTTAGAATGGAGGATGAATATCGTATTT
ATCGTGACTTCAACGTTGTTCTTGCCAAAAATCCATCTAGTGAAGCGATTGACTTTTTTGATTATCTAACAAAAAGCAAA
GACGCTGAAGCAATCTTTCAGCACTATGGCTGGTTTAAGTGA

Protein sequence : 
MKSKNRFLLISLLSFSTSVFADVNLYGPGGPHVPLIKVAESFEKSQSKRVNITFGPQATWNDKAKKNADILFGASEHSAL
AIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSGTAVWEDSVGRMKNVEKLQA
FRSNIHVFAPNSGSARKAFVDGEDIDAWITWVDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDFFDYLTKSK
DAEAIFQHYGWFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 2e-105 100
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 2e-105 100
acfC AAA82706.1 AcfC Virulence VPI Protein 2e-105 100
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 3e-105 100
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 3e-105 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_03915 YP_005332652.1 accessory colonization factor AcfC VFG0105 Protein 1e-105 100
O3Y_03915 YP_005332652.1 accessory colonization factor AcfC VFG0839 Protein 8e-58 52