Gene Information

Name : O3Y_02420 (O3Y_02420)
Accession : YP_005332355.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Unknown
Product : transposase OrfAB subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 547192 - 547536 bp
Length : 345 bp
Strand : +
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
GTGATATTATCATCTCATAAGTTAATAGGTGACATTATGACAAAACGTACAAGACGGCTATTTAGTGCCGAATTCAAACT
GGAAGCGGCACAATTAGTGCTCGATCAAAACTACTCAGTGACTGAAGCGGCTCAAGCCATGAATGTAGGTAAATCTACGA
TGGATAAGTGGGTTCGCCAATTAAAACAAGAGCGCCAAGGCAAAGCACCTAAAGCGTCACCAATGACGCCTGAGCAAATT
GAAATTCGTGAATTAAAAAAGAAGCTCGCTCGTCTTGAAGAGCATAATGAAATATTAAAAAAAGCCACGGCTCTCTTGAT
GTCGGACTCACTGAACAATTCTTGA

Protein sequence :
MILSSHKLIGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLKQERQGKAPKASPMTPEQI
EIRELKKKLARLEEHNEILKKATALLMSDSLNNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-46 95
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-46 95
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-46 95
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-46 95
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-46 95
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-46 95
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-46 95
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 2e-46 95
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 3e-30 75
l7045 CAD33744.1 - Not tested PAI I 536 Protein 9e-31 75
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 9e-31 75
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-26 73
unnamed CAD42034.1 hypothetical protein Not tested PAI II 536 Protein 1e-25 66
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 8e-28 64
unnamed AAC31483.1 L0004 Not tested LEE Protein 6e-30 61
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 8e-30 61
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 8e-30 61
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 6e-31 60
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 4e-31 60
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 8e-22 55
unnamed CAD42047.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 47
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 8e-18 47
tnpA CAB61575.1 transposase A Not tested HPI Protein 3e-17 45
unnamed CAD33780.1 putative transposase Not tested PAI I 536 Protein 1e-12 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG1123 Protein 8e-47 95
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG1485 Protein 4e-31 75
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG1553 Protein 4e-26 66
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG0784 Protein 2e-30 61
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG1566 Protein 1e-14 47
O3Y_02420 YP_005332355.1 transposase OrfAB subunit A VFG1521 Protein 5e-13 44