Gene Information

Name : cadB (O3Y_01300)
Accession : YP_005332135.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : lysine/cadaverine antiporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 285663 - 287000 bp
Length : 1338 bp
Strand : +
Note : COG0531 Amino acid transporters

DNA sequence :
ATGTCATCAAATGCAAAAAAAATCGGCCTGATCGCCTGTACGGGTGTGGTGGCTGGCAACATGATGGGCAGTGGTATTGC
GCTGCTTCCTTCTACGCTTGCGAGCGTAGGTTCAATTTCCATTTATAGCTGGCTGATCTGCATTGTTGGCGCACTCAGTT
TGGCGTTTGTGTTTGCTCGTTTGGCAACCAAAAACCCGCAAGAGGGTGGCCCGATTGCTTATGCAGGGGAAGTGTCACCG
GTGTTTGGTTTCCAAACGGGCGTGCTTTACTACCACGCTAACTGGATTGGTAATTTGGCGATTGCGATTACCGGTGTTTC
TTACCTTTCGGTGTTCTTCCCGGTGCTGAATAACCCGATCCCTGCTGGTTTAGCGACCATTGCTTCGGTTTGGCTATTTA
CCTTAGTCAACTTGCTTGGTGGTAGCTGGGTAAGCCGTTTATGTACCATTGGTTTGGTGCTGATTTTGATCCCTGTAGTC
GGTACGGCTCTGTTTGGTTGGACGCACTTTGACAGCGCGCTCTACAGCCAAAACTGGAACGTGTCTGCCGGTAGCGATGG
CCATGCGGTGATCACTGCAGTGCTGATCTGTCTGTGGTCTTTCGTGGGTGTTGAATCGGCAGCGGTTTCTTCCGGTATGG
TCGAAAACCCAAAACGCACGGTGCCACTGGCAACCATGTTAGGTATTGGTCTTGCGGGCCTTATCTATGTGCTATCAACT
CAAATGATCAGCGGTATGTTCCCTGCCTCTGAAGTGGCGGCATCGGGTGCACCTTTTGCACTGGCGACCACAGCACTGTT
TGGTAGCTGGACTGCGCCATTCGTGTCTGCCTTTACTGCACTAGCGTGTTTCACGTCACTTGGCTCTTGGATGATGCTGG
TCGGCGAAGCGGGCAAACGTGCCGCTAACGATGGCAACTTCCCGAAAGTATTCGGTGAAACCGATCGCAACGGTGTACCG
AAAAAAGGTCTGCTGATTGCTTCCAGCATGATGACATTGCTGATGCTGGTGCTGATGTTCTTCAGCTCAGAAACTGCGCA
CGCTTCCGATCTGTTTAACCAACTGACTACCGATGCGGTTCTGCTGACCATGCTGCCTTATTTCTACTCCAGCATTAACC
TGATCCGCTTCGAAGGCATGACCACTCGCAATACGTTTGTGATGCTGTTCTCCGGTATTGCCAGCCTGTTCTGTATGGTG
GCGCTGGCTGGTGCAGAGGGTTCAACCCTGACTGCAACCTTCATCATGTCGCTGATTATTTTGATGTTCTACAGCAAAAA
AGCGGGTCTGGATAAATACCTCGAGACTCATCCACAACAAGCTTCGGCTCAGTTCTGA

Protein sequence :
MSSNAKKIGLIACTGVVAGNMMGSGIALLPSTLASVGSISIYSWLICIVGALSLAFVFARLATKNPQEGGPIAYAGEVSP
VFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPAGLATIASVWLFTLVNLLGGSWVSRLCTIGLVLILIPVV
GTALFGWTHFDSALYSQNWNVSAGSDGHAVITAVLICLWSFVGVESAAVSSGMVENPKRTVPLATMLGIGLAGLIYVLST
QMISGMFPASEVAASGAPFALATTALFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAANDGNFPKVFGETDRNGVP
KKGLLIASSMMTLLMLVLMFFSSETAHASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNTFVMLFSGIASLFCMV
ALAGAEGSTLTATFIMSLIILMFYSKKAGLDKYLETHPQQASAQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 3e-133 70
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 4e-133 70
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 2e-136 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB YP_005332135.1 lysine/cadaverine antiporter VFG1671 Protein 1e-136 68