Gene Information

Name : O3Y_13055 (O3Y_13055)
Accession : YP_005334469.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2947307 - 2947660 bp
Length : 354 bp
Strand : -
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence :
ATGAAGAGTAAACGCGGTTTTACTTTGCTTGAAGTGCTGGTCGCGCTGGCAATTTTTGCTACCGCGGCGATCAGTGTGAT
CCGCTCGGTCAGTCAACACATCAATACGGTCAATTATCTTGAAGAGAAGATGTTTGCGGCCATGGTCGTGGATAACCAAA
TGGCGCAAGTGATGCTCAATCCGCAATCTTTAGCGGCGCGTGAGGGCAGTGAGCAGATGGCCGGACGGACTTGGTACTGG
AAGCTGAGTCCTGTCAAAACCGCCGACAATCTGCTCAAAGCCTTTGATGTCAGTGTCGCCACAGAAAAAGGCGCGACCCC
AGTCGTGACGGTGCGTAGCTATGTGGCGAACTAA

Protein sequence :
MKSKRGFTLLEVLVALAIFATAAISVIRSVSQHINTVNYLEEKMFAAMVVDNQMAQVMLNPQSLAAREGSEQMAGRTWYW
KLSPVKTADNLLKAFDVSVATEKGATPVVTVRSYVAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-10 43
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_13055 YP_005334469.1 general secretion pathway protein I VFG2052 Protein 3e-12 42