Gene Information

Name : O3Y_08615 (O3Y_08615)
Accession : YP_005333585.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate-binding periplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1975301 - 1976266 bp
Length : 966 bp
Strand : -
Note : COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component

DNA sequence : 
ATGAAAACCATTAATAAGATTACTATCGCAATACTTACTTTGAGTGCTGCTGCTTCTGTCAATGCTGCGACGACTTTAAA
GATGGGGATGCAAGCTTCTGTGGGGTCTGTAGAGTATAACTCGGCAAAAATGCTTGCCGACACATTAGAAGAAATGAGTC
AAGGAGAGATCAAACTCGCTTTGTACCCAAGCGCCCAGCTTGGTGATGATCGTGCCATGCTTCAGCAATTGACGCTGGGA
GATCTCGATATAACTTATGCTGAGTTTGGTCGTATGGGGCTTTGGATACCGCGAGCAGAAGCGGTCATGCTCCCTTATGT
CGCGAAAGATTTTGACCATTTACGCCGCATGTTTGAATCTGACTTTGGTCAAGGTGTTCGTGATGAAATGCTCCAGAAGT
TCAACTGGCGTGCTTTGGACACTTGGTATAACGGTACCCGTGAAACCACTTCAAACCGTCCCCTCAATTCGATTGAAGAT
TTTAAAGGGTTAAAACTTCGAGTCCCGAATGCTAAGCAAAACCTCAACTATGCAAAGCTGTCTGGTGCCTCGCCAACCCC
GATGTCATTCTCTGAAGTTTATTTAGCGCTGCAGACCAATGCCGTAGATGGGCAAGAAAACCCGCTACCAACAATTAAAA
CAATGAAGTTCTATGAAGTGCAAAAGAACTTAGCCATGACACATCATATTGTTAACGATCAAATGGTGATCATTTCGGAA
TCTACTTGGCAGAAGCTTTCTGATACGGATAAAGACATCATTCAGAAAGCCGTGCAGAAAGTGGGAGATGCTCATACACA
GACCGTTAAAACTCAAGAGGCAGAATTGGTCTCCTTCTTCAAGAGTGAAGGTATCAACGTGACTTACCCAGATCTGGAGC
CATTCCGAGAAGCGATGCAACCACTTTACAAGGAGTTTGACAGTAACATCGGTCAGCCGATTGTGTCGAAATTGGCAGCA
ATGTAA

Protein sequence : 
MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLG
DLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIED
FKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE
STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAA
M

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 3e-143 100
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 3e-143 100
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 5e-143 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_08615 YP_005333585.1 C4-dicarboxylate-binding periplasmic protein VFG1112 Protein 1e-143 100