Gene Information

Name : O3Y_08545 (O3Y_08545)
Accession : YP_005333571.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Virulence
Product : type I restriction enzyme HsdR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1952098 - 1955157 bp
Length : 3060 bp
Strand : -
Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

DNA sequence :
ATGGTTAGTAAAACAAATGAACAGGCGCTAGAGGCCGCAATCGAAAAAGGTTTAGCAGGTATTTGTAAAGAAGAGTTAGC
GCTGGGTGAAGCGCCTCTTAATTACAATAATGATCTTTATCTTATTGGCTCTCCAAGTGACTTTGACAAGCAGTACGCTT
TAGATACCCGTTTGTTTTGGCAATTCCTCGAAGATACTCAAGCGAGTGAGTTAGAAAAACTTAAGCGCACCAGCCCTCAC
GATTGGCAGAGAAAAATCCTTGAGCGTTTCGATCGTATGATCAAGCGCCATGGTGTTTTGCGACTATTGAAAAAAGGGCT
AGACGTTGACGATGCCTTTCTATCGTTGATGTACCCGGCACCACTCGCCAGTAGTTCTGAGAAGGTAAAAAAAGATTTTT
CTGCCAACCTGTTTAGTGTGACTCGCCAGGTTTGTTATTCCAATGCAAATCCATTGGAAGAAATTGACATGGTGCTTTTT
ATCAATGGTATCCCTCTGATTACCCTTGAGCTTAAAAACCCATGGACGGGCCAGAACGCTGTTTATCATGGTCAAAAGCA
GTACCGCGATGATAGAGATGCAAATCAGCCATTGTTGAACTTTGCTCGTTGCTTGGTTCACATGGCGGTCGATACCGATG
AAGTCTATATGACGACTAAGCTGGCAGGCAAAAATACCTTCTTCCTGCCGTTCAACAAAGGCTTCAACTTTGGCAAAGGT
AACCCGATTAATCCACATGGGCACAAGACGGCCTACTTGTGGCAAGAGGTATTCCGCAAAGAAAGCATCGCCAATATTAT
TCAGCACTTTATTCGTCTTGATGGCAGCAGTAAAAAGCAGTTGGACAAACGAACTTTGTTCTTCCCTCGATATCACCAAA
TGGATGTCGTACGTCGCTTGGTTGATCACTGCTCAGTTAATGGTGTTGGGCAAACGTATTTGATACAGCACTCAGCGGGG
TCAGGTAAATCTAACTCAATTACATGGGCGGCGTATCAGCTCATCGAAACTTACCCTATTAGCGATGATCTACCAGGAAG
TAGAGGAAAAGAAATGCCTCTATTCGATTCGGTCATCGTTGTTACTGACCGCCGATTGCTCGATAAGCAGTTACGCGACA
ATATAAAAGAGTTCTCTGAAGTGAAGAACATTGTTGCGCCTGCGTTTAAATCGTCAGAACTAAAGTCAGCATTAGAGAAT
GGTAAGAAAATCATCATTACCACCATTCAAAAGTTTCCCTATATTGTCGATGGTATTGCAGACTTAAGTGATAGGCGCTT
TGCTGTCATCATTGATGAAGCACACAGTTCGCAGGATGGGCATAACCAAGATAAGTTAAATGAAGCAATGGGGTTTGTTT
CGGAGGATGTTTTAGACAAAGCATTACAAAGTGCGAAAAATCGTAAGATGCGCTCAAATGCATCTTACTTTGCATTCACC
GCAACGCCCAAAAACACCACTCTAGAAAAGTTTGGTCAGCGACAAGCAGACGGAACTTATGTTCCTTTTCATTTGTACTC
GATGAAACAAGCCATCGAAGAAGGGTTTATCCTCGATGTTATTGCCAATTACACGACCTATAAGAGCTACTACGAGATTG
AAAAATCAATCCAAGATAACCCTGAGTTTGACAGCAAAAAAGCACAGAAGCGCTTACGAGCGTATGTAGAGGCAAGCCAA
GAGACGATAGACACTAAAGCCGAGATCATGCTTGAGCATTTCATCAAGCATGTCGTTAACGGCAAGAAGCTAAAAGGTAA
AGGCAAAGGTATGGTGGTGACTCAAAACATTGAGTCAGCCATACGTTACTATCGGGCACTAACCAGACAGCTCAATAAAA
TGGGCAATCCGTTTAAAGTTGCCATTGCATTCTCTGGCTCAAAAGAAGTCGATGGGATTGAGTACACAGAAGCTGACATT
AATGGTTTCCCAGAAGGTGATACCAAAGATTACTTTGATGTGAACTACAAGCGTAAGGAGCCGGACTCTCCAATCCCTAA
GCACGTAGACCAAGATGCTTACCGGTTGCTGGTAGTGGCGAATAAGTATTTAACAGGCTTTGATCAGCCGAAACTTTGTG
CCATGTACGTGGATAAAAAGTTGGCTAGCGTTTTGTGTGTCCAAGCTCTGTCACGCTTAAACCGTTCAGCGCCAAAGTAC
GGTAAGAAAACGGAAGATCTGTTTGTGTTGGATTTCTTCAACTCAGTGGATGATATCAAAACCGCATTCGACCCTTTCTA
TACATCCACAACGCTTTCTGAAGCGACAGATGTCAATGTTCTTCATGAGCTAAAAGATGATATGGACGACACAGATGTTT
ATGAGTGGTTTGAAGTTGAGGAGTTCAACAAGCGTTTCTTTGAAGGACGAGAGGCTCAGGACCTAAGCCCAATCATTGAC
ATCGCAGCTGCGCGTTTTAACCACGAGTTAGAACTAGAGAACGAGTTTAAAGTCGATTTCAAAGTGAAAGCCAAGCAGTT
TGTGAAAATCTACGGCCAGATTGCATCTATCATGCCTTATGAGGTCGTTCAGTGGGAAAAACTGTTCTGGTTCTTGAAAT
TTTTGATTCCGAAGCTTTCCGTCGAAGACCCAGATAAAGAAGCACTAGACTCATTACTAGATTCAGTTGATTTGAGCTCT
TATGGATTACAAAGGGTTAAGCTTAACCATTCCATCGAGCTAGATGACTCTGAAACTGAGTTAGATCCTCAAAACCCGAA
CCCGCGCGGGGCTTATGGTCCTGAAGCTGAGAAAGATCCGTTAGATGAGATCATCAAAATCTTTAACGAACGCTGGTTCC
AAGGCTGGAGCGCAACACCAGAAGAGCAGAGAGTTAAGTTTGTGAACATTGCTGAGAGCATCCGAAATCACCCAGATTTC
GAAGCTAAATACCAAAACAACGCAGACCCTCATACGCGAGAGTTAGCGTTTGAAAAGATGTTGAAAGAAATCATGCTTCA
ACGTCGTAAAGACGAGTTAGAGCTCTACAAGCTGTTTGCCCAAGACCCAGCTTTTAAAGCGTCTTGGACGCAGAGCATGC
AGCGTATGGTTGGGATGTAA

Protein sequence :
MVSKTNEQALEAAIEKGLAGICKEELALGEAPLNYNNDLYLIGSPSDFDKQYALDTRLFWQFLEDTQASELEKLKRTSPH
DWQRKILERFDRMIKRHGVLRLLKKGLDVDDAFLSLMYPAPLASSSEKVKKDFSANLFSVTRQVCYSNANPLEEIDMVLF
INGIPLITLELKNPWTGQNAVYHGQKQYRDDRDANQPLLNFARCLVHMAVDTDEVYMTTKLAGKNTFFLPFNKGFNFGKG
NPINPHGHKTAYLWQEVFRKESIANIIQHFIRLDGSSKKQLDKRTLFFPRYHQMDVVRRLVDHCSVNGVGQTYLIQHSAG
SGKSNSITWAAYQLIETYPISDDLPGSRGKEMPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIVAPAFKSSELKSALEN
GKKIIITTIQKFPYIVDGIADLSDRRFAVIIDEAHSSQDGHNQDKLNEAMGFVSEDVLDKALQSAKNRKMRSNASYFAFT
ATPKNTTLEKFGQRQADGTYVPFHLYSMKQAIEEGFILDVIANYTTYKSYYEIEKSIQDNPEFDSKKAQKRLRAYVEASQ
ETIDTKAEIMLEHFIKHVVNGKKLKGKGKGMVVTQNIESAIRYYRALTRQLNKMGNPFKVAIAFSGSKEVDGIEYTEADI
NGFPEGDTKDYFDVNYKRKEPDSPIPKHVDQDAYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQALSRLNRSAPKY
GKKTEDLFVLDFFNSVDDIKTAFDPFYTSTTLSEATDVNVLHELKDDMDDTDVYEWFEVEEFNKRFFEGREAQDLSPIID
IAAARFNHELELENEFKVDFKVKAKQFVKIYGQIASIMPYEVVQWEKLFWFLKFLIPKLSVEDPDKEALDSLLDSVDLSS
YGLQRVKLNHSIELDDSETELDPQNPNPRGAYGPEAEKDPLDEIIKIFNERWFQGWSATPEEQRVKFVNIAESIRNHPDF
EAKYQNNADPHTRELAFEKMLKEIMLQRRKDELELYKLFAQDPAFKASWTQSMQRMVGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 100
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 100
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_08545 YP_005333571.1 type I restriction enzyme HsdR VFG1098 Protein 0.0 100