Gene Information

Name : O3Y_08130 (O3Y_08130)
Accession : YP_005333488.1
Strain :
Genome accession: NC_016944
Putative virulence/resistance : Resistance
Product : transporter AcrB/D/F family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1852111 - 1855209 bp
Length : 3099 bp
Strand : -
Note : COG0841 Cation/multidrug efflux pump

DNA sequence :
ATGAGTGAACAGAAGCAGACCCCGCCAGAGAATAATGAGAACCAAGGTGTTGCCGCTTACTTCATCAATAATCGCGTGAT
CAGTTGGATGGTTTCGCTGATTTTTTTGATTGGAGGGACGGCCGCATTTTTTAATTTAGGACGTTTGGAAGACCCCGCTT
TTACCATTAAAGATGCCATGGTGGTGACCTCTTATCCGGGGGCAACTCCTCAGCAAGTGGAAGAGGAAGTAACTTATCCG
CTGGAAAAAGCGATTCAGCAATTAACTTATGTCGATGAGGTGAATTCGATTTCGAGCCGTGGTTTATCCCAGATCACGGT
GACAATGAAAAACAATTATGGCCCGGATGATTTGCCGCAAATCTGGGATGAGCTGCGGCGTAAAGTGAATGATTTAAAAG
GCGCTTTACCGCCGGGGGTGAATCCGCCTTTGGTTATCGATGATTTCGGTGATGTGTATGGCATCTTGTTGGCGGTCACT
GGCGAAGGTTACAGCTACAAAGAGCTACTTGATTATGTGGATTATCTGCGCCGTGAATTGGAGTTAATTGATGGCGTCAG
TAAAGTCTCAGTCAGCGGGCAGCAGCAAGAGCAGGTTTTCATCGAGATCTCGATGAAACGGATCAGCACGCTGGGAATTT
CGCCGCAAACCGTCTTCAATCTGCTCTCGACACAAAACTTAGTCTCGGATGCCGGAGCGATCCGGATCGGCTCTGAGTAT
ATTCGCATTCATCCGACAGGTGAGTTTGACGATGTGGAGAAATTGGGCGACCTGATCCTGAGTGAAAGAGGCGCACAAGG
GCTGATTTATCTACGCGATGTGGCCGAAGTTAAACGTGGCTACGTGGAAGTTCCAAGTAACGTTATCACCTTTAACGGTA
AGCTCGCGCTTAACGTGGGGGTCTCGTTTGCTCAAGGCGTCAACGTGGTGGAAGTCGGGCAACGCTTCGATCGCCGTTTG
GCCGAGCTCAAATATCAACAACCGATCGGGATTGATATTGCCGAAGTGTATAGCCAGCCCAAAGAAGTCGATAAATCGGT
CAGTGGTTTTGTGGTGAGCCTTGGACAAGCGGTCGCCATCGTTATCATCGTATTATTGTTCTTTATGGGGCTGCGCTCGG
GGCTGTTGATTGGTCTTATCCTGCTTTTGACTGTACTGGGCACCTTCATTTTCATGCAGTATTTCAAAATCGACCTACAG
CGTATTTCATTGGGCGCGCTGGTTATCGCTTTAGGGATGTTGGTGGATAATGCGATTGTGGTGGTCGAGGGGATTTTGAT
TGGCACGCAGAAAGGCCGAACGCGCTTGCAAGCTGCAACGGACATTGTCACCCAAACCAAATGGCCACTGCTCGGGGCGA
CAGTGATTGCCGTGACTGCCTTTGCGCCCATTGGCCTGTCGGAAGATGCAACGGGTGAATACTGTGGAACCTTGTTCACG
GTATTGCTTATTTCGCTGATGCTGAGTTGGTTTACGGCCATTTCGCTGACGCCATTTTTTGCCGATCTGTTCTTCCGTGG
TCAGAAAGCGCCAGCCAGCGGTGAAGAAAGCGATCCCTACCAAGGTTTTATCTTTGTGGTCTATCGCCGATTCCTTGAGT
TTTGTATGAGGCGCGCTTGGCTAACGATGGGCGTGTTGGTGCTCGGACTTGCAGCGAGTTTGTATGGCTTTACCAAAGTG
AAACAAGCTTTCTTCCCATCATCGACTACCCCTATGTTTATGGTCGATGTTTGGATGCCTGAAGGGACGGATATTCGAGC
GACGGATGCCATTTTATTAGAGCTGGAAAAATGGTTGTCGGCTCAAGAAAGTGTCGACAGCGTGACCACTACCGCAGGCA
AAGGTCTACAACGCTTCATGCTGACTTACTCACCAGAGAAAAGTTATGCCGCTTACGGTGAGATCACCACACGGGTTACG
GACTACCAACAGCTCGCTGCCTTGATGGCGCGTTTTCGGGCGCACTTAGACGCCCGCTATCCTCAGATTAACTACAAGCT
GAAACAGATTGAGTTAGGGCCAGGTGGCGGAGCCAAAATTGAAGCGCGCATTGTAGGTTCAGACCCAACGGTACTGCGCA
GTATCGCAGCGCAAGTGATGGATGTGATGTACGCTGACCCCGGTGCCTACAACATCCGCCACGATTGGCGTGAACGCACC
AAAGTGTTGGAGCCGCAGTTTAATGAAAGCCAAGCGCGTCGTTATGGGATCACCAAGGCGGATGTGGATGAGTTTTTAGC
CATGTCATTCTCGGGTAAAACCATAGGGGTGTATCGGGATGGCACCACCTTGATGCCGATTGTGGCACGTTTGCCGGAAG
AAGAGCGGGTGGACATTCGTAATATCGAAGGCATGAAAATCTGGAGCCCAGCACTGAGTGAGTATATTCCATTGCAGCAA
GTGACTCTTGGTTACGAAATGCGTTGGGAAGATCCGCTGATTGTGCGTAAAAATCGTAAGCGCATGCTGACGGTGATGGC
GGACCCAGATTTGTTAGGCGAAGAAACCGCTGCCACGTTACAACAGCGTTTGCAGCCACAGATTGAAGCCATTCCTTTAC
CGCCGGGTTATTTCCTTGAATGGGGCGGTGAGTATGAGTCATCCGGTGATGCTAAAGCTTCTTTGTTTAAAACCATGCCA
TTGGGTTATTTGTTCATGTTCCTTATCACCGTATTCTTATTTAACTCGGTGAAGGAGTCGCTGATCGTTTGGCTGACAGT
ACCTTTGGCGGTGATCGGGGTGACGACAGGTTTGTTGGCGCTGAATACGCCGTTTGGGTTTATGGCCTTGCTCGGCTTCT
TGAGTCTTTCGGGTATGTTACTCAAAAACGGCATTGTGTTACTGGATCAGATCGAAATTGAAATGCACTCCGGCAAAGAT
CCGTATTTGGCGGTTGTCGATGCGTCTTTGAGCCGTGTTCGCCCCGTCTGTATGGCGGCGGTCACCACCATACTCGGTAT
GATCCCATTGCTGCCGGATATTTTCTTCCGGCCTATGGCGGTAACCATCATGTTTGGTTTGGGTTTTGCGACCGTACTGA
CTCTGATTGTCGTGCCGGTACTGTATCGCTTATTCCATCATGTAAAAGTCCCACAATAG

Protein sequence :
MSEQKQTPPENNENQGVAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTYP
LEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLVIDDFGDVYGILLAVT
GEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIRIGSEY
IRIHPTGEFDDVEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQRFDRRL
AELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMQYFKIDLQ
RISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLFT
VLLISLMLSWFTAISLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLYGFTKV
KQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQRFMLTYSPEKSYAAYGEITTRVT
DYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHDWRERT
KVLEPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEYIPLQQ
VTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASLFKTMP
LGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMHSGKD
PYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
O3Y_08130 YP_005333488.1 transporter AcrB/D/F family protein BAC0428 Protein 0.0 100
O3Y_08130 YP_005333488.1 transporter AcrB/D/F family protein BAC0519 Protein 0.0 86
O3Y_08130 YP_005333488.1 transporter AcrB/D/F family protein BAC0526 Protein 0.0 58
O3Y_08130 YP_005333488.1 transporter AcrB/D/F family protein BAC0425 Protein 0.0 43