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Name : smpB (BLASA_1023) Accession : YP_005328008.1 Strain : Blastococcus saxobsidens DD2 Genome accession: NC_016943 Putative virulence/resistance : Unknown Product : trans-translation protein, binds tmRNA and tRNA (SsrA-binding protein) Function : - COG functional category : - COG ID : - EC number : - Position : 982513 - 982989 bp Length : 477 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393194; Product type f : factor DNA sequence : ATGCCGCGGGAACAGGGGCGGAAGTTCATCGCCCAGAACAAGAAGGCGCGGCACGACTACTCGATCCTCGACACCTACGA GGTGGGTCTCGTGCTCACCGGCACCGAGGTGAAGAGCCTGCGTGCCGGCCGGGCCTCCCTCGTGGACGGCTTCGCCTCCA TCGACGACGGCGAGGTGTGGCTGCAGCATGTGCACATCCCCGAGTACACGCAGGGCACCTGGACCAACCACGCCCCGCGC CGCAAGCGGAAGGTGCTCATGCACCGCAGCGAGATCGACAAGCTGCTGGGCAAGACCAAGGAGGGCGGGCTCACCCTCGT CCCGCTCGACCTGTACTTCAAGGACGGCAAGGTCAAGGCCACCCTCGCGCTGGCGAAGGGCAAGAAGTCCTACGACAAGC GGCACGACCTCGCCGAGCGCGACTCGCGCCGGGAGATCCAAAAGGCCTTCGGCCGCTACGTGAAGGGACGCCGGTGA Protein sequence : MPREQGRKFIAQNKKARHDYSILDTYEVGLVLTGTEVKSLRAGRASLVDGFASIDDGEVWLQHVHIPEYTQGTWTNHAPR RKRKVLMHRSEIDKLLGKTKEGGLTLVPLDLYFKDGKVKATLALAKGKKSYDKRHDLAERDSRREIQKAFGRYVKGRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-39 | 61 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 3e-28 | 49 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-15 | 42 |
