Gene Information

Name : fliI (BLASA_0841)
Accession : YP_005327832.1
Strain : Blastococcus saxobsidens DD2
Genome accession: NC_016943
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 818604 - 819914 bp
Length : 1311 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme

DNA sequence :
GTGAGCGTCCCCGCCACCGTCCTCGAGCGCGCCCGCGCCGCCGCGCGGCCCCAGGTCACCGGCGTCGTCACCGGTGCGAT
GGGCCTGACGCTGAGCGTCGACGGCGTGAGCGCCGCCGTCGGCGACCTGGTGGAGATCGACCCGACCGGGAAGCCGCTGC
TGGCGGAGGTCGTCGCGGTGGGCCGGGACCGGCTCACCTGCATGCCGCTCGGGGGGCTGTCCGGCGTGCACGCCGGCGCA
CCGGTCCGCGCGACCGGCCGCCCGCTGCAGGTCCCCGTGGGCGAGGCGCTGCTGGGCCGTGTGCTCGACGGGCTCGGCCG
TCCGGTCGACGGCGGGCCGCCGCTGGGCGGCCTGGCCTCCTGGGTCGACCTGGAGACCCGGACGCCGCACGCCCTCTCGC
GCGCCCGGGTGGCGGAGCCGCTGACCTTCGGGGTCCGCGCGCTGGACACCCTGGTGCCCTGCGGCAAGGGGCAGCGCCTG
GGCATCTTCGCCGGCTCCGGCGTCGGCAAGTCCAGCCTGCTCGCCCAGATCACCCGCGGCACCGATGCGGACGTCCGCGT
CATCGGGCTGATCGGCGAGCGTGGCCGCGAGGTCCGCGAGTTCATCGAGGAGAACCTCGGCCCGGAGGGGATGGCCCGCA
CGGTGGTCGTCGTCGCCACCTCCGACGAGCCGCCGCTGGTCCGCCTGAAGGCGGCGTTCGTCGCCACCCGCATCGCCGAG
GCCTTCCGCGACGAGGGGCGGGACGTCCTGCTGCTGATGGACTCGATCACCCGCACCGCCATGGCGCAGCGCGAGGTCGG
TCTCTCCGCCGGTGAGCCACCGGCCACGCGCGGGTACCCGCCGAGCGTCTTCGCGATGATGCCGCAGCTGCTGGAGAAGG
CGGGCACGGGCGCCACGGGCTCGATCACCGGCCTCTACACCGTCCTCGTGGAGGGCGACGACCACAACGAGCCGATCGCC
GACACCGCCCGGTCGATCCTCGACGGGCACGTCGTGCTCACCCGCACGCTGGCCACGACCGGCCACTTCCCCGCCATCGA
CGTCCTGGAGTCGATCTCCCGCGTCGCCGGCGCGGTGGTACCGCCTGCGCAGATGGCCGACGCCCGGGAGGTCCGCCGGC
TCATGGGTGCGCTGCGGGACGTTCGGGAGCTGATCGAGATCGGCGCCTACCAGGCCGGCAGCGATCCCCTGGTCGACCGC
GCGCGTCAGCTGGCGCCGACCATCGACGCGTTCCTGCAGCAGCCGATGGGTGAGTCGACCCCGCCGGCCGAGGCCTGGGC
GTGGCTGCAGCGGATCGTGAGAGGCGCATGA

Protein sequence :
MSVPATVLERARAAARPQVTGVVTGAMGLTLSVDGVSAAVGDLVEIDPTGKPLLAEVVAVGRDRLTCMPLGGLSGVHAGA
PVRATGRPLQVPVGEALLGRVLDGLGRPVDGGPPLGGLASWVDLETRTPHALSRARVAEPLTFGVRALDTLVPCGKGQRL
GIFAGSGVGKSSLLAQITRGTDADVRVIGLIGERGREVREFIEENLGPEGMARTVVVVATSDEPPLVRLKAAFVATRIAE
AFRDEGRDVLLLMDSITRTAMAQREVGLSAGEPPATRGYPPSVFAMMPQLLEKAGTGATGSITGLYTVLVEGDDHNEPIA
DTARSILDGHVVLTRTLATTGHFPAIDVLESISRVAGAVVPPAQMADAREVRRLMGALRDVRELIEIGAYQAGSDPLVDR
ARQLAPTIDAFLQQPMGESTPPAEAWAWLQRIVRGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-88 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-91 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-91 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-89 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-89 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-89 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-89 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-89 51
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 8e-83 51
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-83 51
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-82 51
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-82 51
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-91 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-89 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-89 49
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-75 47
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-74 47
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-79 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-79 47
escN AAK26715.1 EscN Virulence LEE Protein 3e-81 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 7e-81 47
escN AAL57542.1 EscN Virulence LEE Protein 3e-81 47
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-81 47
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-81 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-81 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-81 47
escN AAC31513.1 L0034 Virulence LEE Protein 2e-81 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-81 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-81 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-81 47
escN AAC38383.1 EscN Virulence LEE Protein 3e-81 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 9e-74 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-77 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 5e-78 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 5e-78 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-83 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-74 46
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-79 46
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-68 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-70 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-70 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 4e-73 45
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-69 45
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 8e-69 45
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-69 45
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 8e-69 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-70 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-63 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 6e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0048 Protein 7e-91 53
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0390 Protein 4e-90 52
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0192 Protein 2e-91 51
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0515 Protein 7e-83 51
fliI YP_005327832.1 flagellum-specific ATP synthase VFG2331 Protein 3e-89 51
fliI YP_005327832.1 flagellum-specific ATP synthase VFG2499 Protein 2e-86 51
fliI YP_005327832.1 flagellum-specific ATP synthase VFG1254 Protein 6e-90 50
fliI YP_005327832.1 flagellum-specific ATP synthase VFG2144 Protein 6e-87 49
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0812 Protein 9e-82 47
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0730 Protein 2e-81 47
fliI YP_005327832.1 flagellum-specific ATP synthase VFG1778 Protein 3e-68 46
fliI YP_005327832.1 flagellum-specific ATP synthase VFG0555 Protein 3e-69 45
fliI YP_005327832.1 flagellum-specific ATP synthase VFG2459 Protein 3e-65 44
fliI YP_005327832.1 flagellum-specific ATP synthase VFG1008 Protein 6e-63 43