Gene Information

Name : BLASA_0596 (BLASA_0596)
Accession : YP_005327599.1
Strain : Blastococcus saxobsidens DD2
Genome accession: NC_016943
Putative virulence/resistance : Virulence
Product : putative ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 575615 - 578143 bp
Length : 2529 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type e : enzyme

DNA sequence :
ATGTTCGAACGGTTCACCGACCGAGCCCGCCGCGTTGTTGTCCTGGCCCAGGAAGAGGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAAGGCGTCGCTGCCAAGGCGCTGGAATCCCTGGGCA
TCTCGCTCGAGGGCGTCCGCCAGCAGGTCGAGGAGATCATCGGCCAAGGCCAGCAGGCCCCCTCCGGTCACATCCCCTTC
ACCCCGCGGGCGAAGAAGGTGCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAAGGCGTCGCCGCCCAGGTCCTCGTGAAGCTCGGCGCCGACCTCAACCGCG
TCCGCCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGCCGGCCGCGGCCGGCGGCCCCGCCGAGGGCACG
CCGTCGACCTCGCTGGTGCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGCGACCAGAAGCTCGACCCGGTGAT
CGGGCGGGCCAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTCCTCATCGGCGAGC
CCGGCGTCGGCAAGACCGCCGCCGTCGAGGGGCTGGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACGCTCAAGGAC
AAGCAGCTCTACACCCTCGACCTGGGGGCGCTCGTCGCCGGTTCGCGCTACCGCGGTGACTTCGAGGAGCGGCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACCCTCGTCGGGGCCGGTGCCG
CGGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTCGCCCGCGGTGAGCTGCAGACCATCGGTGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCGCTGGAGCGCCGCTTCCAGCCCATCCAGGTCAGCGAGCCGAC
CCTCGCCCACACCGTGGAGATCCTGAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGGATCAGCATCACCGACAGCG
CGCTCGTGGCTGCCGCGACGCTGGCCGACCGGTACATCTCCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATCGAC
GAGGCCGGCGCCCGGATGCGGATCAAGCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGACAAGATCGCGGCCGT
CCGCCGCGAGAAGGAGTCGGCGATCGACGCGCAGGACTTCGAGAAGGCCGCGTCGCTGCGCGACACCGAGAAGCAGCTCC
TGGGCGAGAAGGCCGAGCGCGAGAAGCAGTGGAAGGCCGGCGACATGGACGTCGTCGCGGAGGTCGACGACGAGCAGATC
GCCGAGGTCCTCGCGAACTGGACGGGTATCCCGGTCTTCAAGCTGACCGAGGAGGAGACCTCGCGGCTGCTCCGCATGGA
GGACGAGCTCCACAAGCGGATCATCGGCCAGGAAGAGGCCATCAAGAGCGTCAGCCAGGCGATCCGGCGCACGCGAGCGG
GCCTCAAGGACCCGCGCCGTCCCGGTGGTTCGTTCATCTTCGCCGGCCCCTCGGGTGTCGGTAAGACGGAGCTGGCCAAG
GCGCTCGCGCAGTTCCTCTTCGGTGAGGACGACGCGCTGATCCAGATCGACATGGGTGAGTTCCACGACAAGTTCACCGT
GTCGCGTCTGGTCGGTGCGCCTCCCGGTTACGTCGGTTACGACGAGGGCGGTCAGCTGACCGAGAAGGTGCGGCGCAAGC
CGTTCTCGGTGGTCCTCTTCGACGAGATCGAGAAGGCGCACGCAGATGTGTTCAACACGCTGCTGCAGGTTCTCGAGGAT
GGTCGGCTCACCGATGGTCAGGGCCGGATCGTGGACTTCAAGAACACGATCCTGATCCTCACGACCAACCTCGGTACGCG
GGACATCTCCAAGGCCGTCGGCCTCGGATTCCAGGCCGGGAATGACAACCAGAGCAACTACGAGCGGATGAAGCTCAAGG
TCAACGAGGAGCTCAAGCAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGACATCGTCGTGTTCCACCAGCTGACC
GAGGACGAGATCGTCCACATCGTGGACCTCATGCTCGCCCGACTCGAGACGCAGCTGAAGAACAAGGACATGGCGATCGA
GGTGACCCCGGCGGCGAAGAAGCTGCTGGCGACCCGTGGGTTCGACCCCGTCCTGGGTGCCCGGCCGCTGCGCCGGACCA
TCCAGCGCGAGATCGAGGACGCGCTGAGCGAGAAGATCCTCTACGGCGAGCTGACCAGCGGTCAGATCGTGGTGGTGGAC
GTCGACGACGCCGAGGGTCCCGCGCAGAAGTTCACCTTCCGCGGCGAGCCCAAGCCGCTCGACCTGCCCGACACCCCGCC
GGTGGCGCTCTCCGGCGGCGACGAGGGCCCTGCGGCCTCGGCCGAGTAA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPAAAGGPAEGT
PSTSLVLDQFGRNLTQAARDQKLDPVIGRAKEIERVMQVLSRRTKNNPVLIGEPGVGKTAAVEGLAQAIVKGEVPETLKD
KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVSEPTLAHTVEILKGLRDRYEAHHRISITDSALVAAATLADRYISDRFLPDKAIDLID
EAGARMRIKRMTAPPDLREFDDKIAAVRREKESAIDAQDFEKAASLRDTEKQLLGEKAEREKQWKAGDMDVVAEVDDEQI
AEVLANWTGIPVFKLTEEETSRLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLKDPRRPGGSFIFAGPSGVGKTELAK
ALAQFLFGEDDALIQIDMGEFHDKFTVSRLVGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHADVFNTLLQVLED
GRLTDGQGRIVDFKNTILILTTNLGTRDISKAVGLGFQAGNDNQSNYERMKLKVNEELKQHFRPEFLNRIDDIVVFHQLT
EDEIVHIVDLMLARLETQLKNKDMAIEVTPAAKKLLATRGFDPVLGARPLRRTIQREIEDALSEKILYGELTSGQIVVVD
VDDAEGPAQKFTFRGEPKPLDLPDTPPVALSGGDEGPAASAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 77

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLASA_0596 YP_005327599.1 putative ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 0.0 61
BLASA_0596 YP_005327599.1 putative ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 1e-147 50