Gene Information

Name : fepD (BLASA_4755)
Accession : YP_005331575.1
Strain : Blastococcus saxobsidens DD2
Genome accession: NC_016943
Putative virulence/resistance : Virulence
Product : iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4576864 - 4577919 bp
Length : 1056 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 89213950, 91072220, 92269759; Product type t : transporter

DNA sequence : 
GTGGCCACCACGGTCGACGTCCCGGCCCGGGGCGCGGCACGACCGAGCGCGCGTCCGCTGCGCGCCCGCCGGCTGGGCAC
GCTGCTCCTGCTGCTGGTGCTCGTGGTCGCCGCCGCGCTGGCCAGCATCGCCGTCGGCACCCGTGCCATCGGGCTGGGCG
AGGTGTGGGGCGCGCTGCTCGACTCCTCGCTGGACACCGAGGAAGCAGTGATCATCCGCGAGCTCCGGGTGCCGCGGACG
GTGCTCGGGCTCATGGTCGGGGCCGCCCTCGCCCTGGCCGGTGCCCTCATGCAGGGCCACACCCGCAACCCGCTGGGCGA
CCCGGGGCTGCTCGGGGTCACCGCGGGCGCCTCGCTCGCCGTCGTCCTGGCGATCTCGACCCTGGGCATCACCCATCCGG
GCGGTTACGTCTGGTTCGCCTTCGCCGGGGCGCTGGCCGGCACCGTGCTGGTCTACGCGATCGGCTCGGCCGGGCCAGGC
GGGGCGACGCCGGTCACCCTCGCGCTGGCCGGGGCGGCGCTGTCGGCCCTCCTGTTCGCGCTTGTCCGGGCCATCGTGGT
CGCCGACGAGCAGACGCTGGACAGCTTCCGCTTCTGGGTGGTCGGCTCACTGGCCGGCCGGGACGCCGCGGTGGCCTGGC
AGGTGGCCCCCTCCCTCGCCGCCGGCCTCGTCCTCGCGCTGGTCAACGCGCCCGCGCTGAACCTGCTGGGCCTGGGCGAC
GACGTGGCGCGCGGGCTGGGGCAGCGCATCTGGCTGGCCCGCGCGGTGGGGCTGGCCGCCGTCACGCTCCTCGCCGGCGC
CGCCACCGCCGCTGCCGGGCCGATCGCGTTCGTCGGCCTGGTGGTGCCGCACGCCGTCCGCGCGCTCACCGGCCCCGACC
ACCGCTGGCTGCTGCCCTGCTCGGCGCTGCTGGGCGCGACCCTGCTGCTGGTCGCCGACGTGCTCGGCCGGATCGTCGCC
CGCCCTGGCGAACTGCAGGTGGGCATCGTGCTGGCGCTGATCGGCGCACCCTTCTTCGTCGCGCTCGTGCGCCGGCGCCG
GACGGCCGGGCTGTGA

Protein sequence : 
MATTVDVPARGAARPSARPLRARRLGTLLLLLVLVVAAALASIAVGTRAIGLGEVWGALLDSSLDTEEAVIIRELRVPRT
VLGLMVGAALALAGALMQGHTRNPLGDPGLLGVTAGASLAVVLAISTLGITHPGGYVWFAFAGALAGTVLVYAIGSAGPG
GATPVTLALAGAALSALLFALVRAIVVADEQTLDSFRFWVVGSLAGRDAAVAWQVAPSLAAGLVLALVNAPALNLLGLGD
DVARGLGQRIWLARAVGLAAVTLLAGAATAAAGPIAFVGLVVPHAVRALTGPDHRWLLPCSALLGATLLLVADVLGRIVA
RPGELQVGIVLALIGAPFFVALVRRRRTAGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 4e-18 43
fecD AAL08452.1 FecD Virulence SRL Protein 2e-09 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005331575.1 iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element BAC0163 Protein 1e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_005331575.1 iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element VFG0926 Protein 4e-23 47
fepD YP_005331575.1 iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element VFG1044 Protein 2e-18 43
fepD YP_005331575.1 iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element VFG1043 Protein 1e-09 41