Gene Information

Name : SAMSHR1132_05920 (SAMSHR1132_05920)
Accession : YP_005325117.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 680110 - 680907 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCGCTTGCATGGACAACAAGTTAAAATTGGTTATGGGGATAGCACGATTATAAATAAATTAGATGTTGAAATTCC
AGATGGAAAAGTTACGTCCATTATTGGTCCTAATGGTTGTGGAAAATCAACTTTATTAAAAGCTTTGTCACGTCTATTAG
CAGTTAAAGAAGGCGAAGTATTTTTAGATGGACAAAACATTCATACACAATCTACTAAAGAAATTGCTAAAAAAATTGCT
ATTTTACCTCAATCACCTGAAGTAGCAGATGGCTTAACAGTCGGAGAATTAGTGTCATATGGACGCTTCCCTCATCAAAA
AGGATTTGGTAGGTTAACAGAAGAAGATAAAAAAGAAATTGATTGGGCAATGGAAGTGACAGGTACGGATGCGTTTCGTC
ATCGTTCAATTAATGATTTAAGTGGTGGTCAGAGACAACGCGTGTGGATTGCGATGGCTTTAGCTCAAAGAACTGACATT
ATCTTTTTAGATGAACCAACAACTTATTTAGATATTTGTCACCAGTTAGAAATCCTTGAATTAGTTCAAAAGTTAAATCA
GGAGCAAGGTTGTACAATAGTCATGGTATTGCATGATATTAATCAAGCCATTCGATTCTCAGACCATCTTATTGCAATGA
AATCTGGTGATATTGTTGCGCATGGTTCTACAGAAGACGTATTAACACAAGAGATTTTAGAAAAAGTTTTCAACATTGAT
GTCGTATTAAGTAAAGATCCAAAAACTGGTAAACCTTTACTTGTAACTTATGATTTATGTCGCAGAGCTTATTCTTAA

Protein sequence :
MSRLHGQQVKIGYGDSTIINKLDVEIPDGKVTSIIGPNGCGKSTLLKALSRLLAVKEGEVFLDGQNIHTQSTKEIAKKIA
ILPQSPEVADGLTVGELVSYGRFPHQKGFGRLTEEDKKEIDWAMEVTGTDAFRHRSINDLSGGQRQRVWIAMALAQRTDI
IFLDEPTTYLDICHQLEILELVQKLNQEQGCTIVMVLHDINQAIRFSDHLIAMKSGDIVAHGSTEDVLTQEILEKVFNID
VVLSKDPKTGKPLLVTYDLCRRAYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-62 51
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-60 49
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-60 49
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-60 49
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-60 49
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-56 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-56 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-56 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-56 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-58 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-58 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-58 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_05920 YP_005325117.1 ferrichrome transport ATP-binding protein BAC0164 Protein 7e-54 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_05920 YP_005325117.1 ferrichrome transport ATP-binding protein VFG0925 Protein 9e-64 50
SAMSHR1132_05920 YP_005325117.1 ferrichrome transport ATP-binding protein VFG1042 Protein 6e-54 44