Gene Information

Name : SAMSHR1132_23680 (SAMSHR1132_23680)
Accession : YP_005326864.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Virulence
Product : putative ATP-dependent protease ATP-binding subunit ClpL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2567505 - 2569610 bp
Length : 2106 bp
Strand : +
Note : -

DNA sequence :
ATGAATAACGGTTTTTTCAATAGTGACTTTGATTCAATTTTTCGAAGAATGATGCAAGACATGCAAGGTACAAATCAAAG
TGGTAATAAGAAATACTATATTAATGGCAAAGAAGTTTCACCCGAAGAACTAGCGCAACTCACGCAACAAAGTGGCAATC
ACTCTGCCGAACAAAGTGCGCAAGCTTTTCAACAAGCAGCACAAAGACAACAAGGACAACAAGGTGGCAACGGCAATTAT
TTAGAACAAATTGGTCGTAACCTTACACAAGAAGCACGCGATGGTTTATTAGATCCAGTCATTGGCCGTGATAAAGAAAT
TCAAGAAACTGCTGAAGTCTTAAGTAGACGAACTAAAAACAATCCTATATTAGTTGGAGAAGCTGGTGTTGGTAAAACTG
CGATTGTTGAAGGTTTAGCACAAGCAATCGTTGAAGGAAATGTACCGGCAGCAATCAAAGACAAAGAAATTATTTCTGTA
GATATTTCATCATTAGAAGCCGGAACACAATACCGTGGTGCTTTTGAAGAAAATATTCAAAAGTTAATTGAAGGTGTTAA
ATCTTCACAAAATGCCGTACTATTCTTTGATGAAATCCATCAAATTATCGGTTCAGGTGCTACAGGAAGTGATTCAGGTA
GTAAAGGCTTATCCGACATTTTGAAACCTGCATTAAGTCGTGGCGAGATTTCAATTATTGGTGCAACAACACAAGATGAA
TATCGAAACAATATCCTTAAAGACGCTGCGTTAACTCGCCGTTTTAATGAAGTACTTGTAAATGAACCTAGCGCTGAAGA
TACAGTTGAAATTTTAAAAGGTATTCGTGAAAAATTCGAGAAACACCATCAAGTAAAATTACCAGATGATGTGTTAAAAG
CATGTGTGGACTTATCAATTCAATATATCCCACAACGGTTATTACCAGATAAAGCGATTGATGTATTAGATATTACAGCA
GCTCACTTATCTGCACAAAGTCCTGCAATTGATAAAGTAGAGACTGAAAAACGCATTTCAAATTTAGAAAATGATAAACG
AAAAGCAGTTAGTGCTGAAGAATATAAAAAAGCTGATGATATTCAAAACGAAATCAAATCATTGCAAGATAAATTAGAAA
ATAGCAATGGCGAACATACTGCAGTTGCTACAGTTCATGATATTTCTGATACGATTCAACGATTAACTGGTATTCCAGTA
TCTCAAATGGATGATAATGACATTGAACGTTTAAAAAACATTTCTAATCGTTTAAGAAGTAAAATCATCGGTCAAGATAA
AGCTGTAGAAATGGTTTCACGTGCCATTCGTCGTAATCGCGCTGGGTTTGATGACGGCAATCGTCCAATTGGTAGCTTCC
TATTTGTCGGTCCTACTGGTGTGGGTAAAACAGAACTTGCTAAACAACTAGCAATTGACCTCTTTGGTAACAAAGATGCG
CTTATCCGACTTGATATGAGTGAATACAGTGATACAACTGCTGTTTCAAAAATGATAGGTACAACTGCTGGCTATGTCGG
TTACGATGATAATTCAAATACATTAACTGAAAAAGTACGTCGTAATCCGTATTCAGTCATTCTATTTGATGAAATTGAAA
AAGCAAACCCACAAATTTTAACATTGTTATTACAAGTTATGGACGATGGTAATTTGACAGATGGCCAAGGTAATGTCATT
AACTTTAAAAATACAATTATTATTTGTACATCAAATGCTGGATTTGGAAATGGCAATGATACTGAAGAAAAAGATATTAT
GCATGAAATGAAAAAATTCTTCCGTCCTGAATTCCTTAACCGCTTCAACGGCATCGTTGAATTCTTACATTTAGATAAAG
ATGCATTACAAGACATCGTCAACTTATTATTAGACGATGTACAAACTACATTAGATAAAAAAGGTATTACGATGGACGTT
TCTCAAGATGCTAAAGATTGGTTGATTGAAGAAGGTTATGATGAAGAATTAGGTGCGCGTCCATTAAGACGTATTGTTGA
ACAACAAGTACGCGACAAAATTACAGATTACTATTTAGATCATACAGACGTTAAACATGTGGATATAGATGTTGAAAATA
ATGAATTAGTCGTGAAAGGTAAATAA

Protein sequence :
MNNGFFNSDFDSIFRRMMQDMQGTNQSGNKKYYINGKEVSPEELAQLTQQSGNHSAEQSAQAFQQAAQRQQGQQGGNGNY
LEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISV
DISSLEAGTQYRGAFEENIQKLIEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDE
YRNNILKDAALTRRFNEVLVNEPSAEDTVEILKGIREKFEKHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITA
AHLSAQSPAIDKVETEKRISNLENDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPV
SQMDDNDIERLKNISNRLRSKIIGQDKAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDA
LIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVI
NFKNTIIICTSNAGFGNGNDTEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQTTLDKKGITMDV
SQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDIDVENNELVVKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-138 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_23680 YP_005326864.1 putative ATP-dependent protease ATP-binding subunit ClpL VFG0080 Protein 2e-148 47
SAMSHR1132_23680 YP_005326864.1 putative ATP-dependent protease ATP-binding subunit ClpL VFG0079 Protein 5e-139 43