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Name : SAMSHR1132_22480 (SAMSHR1132_22480) Accession : YP_005326744.1 Strain : Staphylococcus aureus MSHR1132 Genome accession: NC_016941 Putative virulence/resistance : Virulence Product : gamma-hemolysin component A Function : - COG functional category : - COG ID : - EC number : - Position : 2427405 - 2428367 bp Length : 963 bp Strand : + Note : - DNA sequence : ATGAAAGAAAAAATAAATAGAAAGAAAGTGATTTCTATGGTTAAAAATAAAATATTAGCAGCAACTTTATCTATAGGTTT ACTTGCTCCTCTTGCCAATCCATTTATAGAAACGTCTAAAGCAGAAAATAATATCGAAGATATCGGCAAAGATGCTGAAA TAATTAAAAGAACTCAAGATGTTAGTAGCCAAAGATGGGGCGTTACTCAAAATATTCAATTCGATTTTGTCAAAGACAAG AAGTATAACAAAGATGCTTTAGTTGTAAAAATGCAAGGTTTTATTAAATCTAGAACCACTTACTCAGAACTAAAAAAATA TCCTTACATTAAAAGAATGACATGGCCATTTCAATATAACATTGGTTTGAAAACGAAAGATCCTAATGTTGACTTAATCA ACTACCTTCCTAAAAATAAAGTAGAAACAACAGATGTAAGCCAAAAATTAGGCTATAACATTGGTGGTAGTTTTCAATCA GCACCATCTATTGGTGGTAGTGGTTCATTTAATTATTCTAAAACAATTAGTTATACACAAAAAAGCTATGTAACAGAAGT GGATAGCCAAAACTCAAAAAGCGTTAAATGGGGTGTCAAAGCCAATTCATTTGCGACTGATTCAGGGCAAGTATCTGCAT ACGATCAATATTTGTTTGCACAAGATCCAACAGGCCCATCAGCAAGAAACTTTTTCGTTCCGGATAATCAACTACCTCCT TTAATCCAAAGTGGCTTTAACCCTTCATTTATAACAGCACTTTCACACGAAAGAGGTAAAGGTGATACAAGTGAATTTGA GATTACTTATGGCCGAAACTTAGATGCCACATACGCTTATATATCAAGAGATCGTCTAGCTGTTGATAGAAAACATAATG CATTTCCAAATAGAAACTTTACTGTTAAATATGAAGTTAACTGGAAAACACATGAAGTCAAAGTAAAAAGCGTATCTCGT TAG Protein sequence : MKEKINRKKVISMVKNKILAATLSIGLLAPLANPFIETSKAENNIEDIGKDAEIIKRTQDVSSQRWGVTQNIQFDFVKDK KYNKDALVVKMQGFIKSRTTYSELKKYPYIKRMTWPFQYNIGLKTKDPNVDLINYLPKNKVETTDVSQKLGYNIGGSFQS APSIGGSGSFNYSKTISYTQKSYVTEVDSQNSKSVKWGVKANSFATDSGQVSAYDQYLFAQDPTGPSARNFFVPDNQLPP LIQSGFNPSFITALSHERGKGDTSEFEITYGRNLDATYAYISRDRLAVDRKHNAFPNRNFTVKYEVNWKTHEVKVKSVSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 1e-107 | 75 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 3e-100 | 69 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 4e-97 | 66 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 4e-97 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SAMSHR1132_22480 | YP_005326744.1 | gamma-hemolysin component A | VFG1273 | Protein | 1e-128 | 85 |
| SAMSHR1132_22480 | YP_005326744.1 | gamma-hemolysin component A | VFG1274 | Protein | 4e-94 | 70 |
| SAMSHR1132_22480 | YP_005326744.1 | gamma-hemolysin component A | VFG1277 | Protein | 2e-97 | 66 |
