Gene Information

Name : SAMSHR1132_17930 (SAMSHR1132_17930)
Accession : YP_005326299.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Unknown
Product : phage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1975610 - 1979395 bp
Length : 3786 bp
Strand : -
Note : -

DNA sequence :
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCA
TAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGAC
ATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTAC
ACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAA
GACAACTTCAGAAGCATTGAAAGATGTGTTGAGCGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTAC
GTACTACGTCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGTATTGGAT
TTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAA
AGAAATTGAGTATAGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTG
TGGGACCCGAAAATGACAAAGGAAAGCGTTTAGAGTTAGTTGTGACTGATGACGAAGCACAAAGTCAATTCAACTTACCT
ACCCGTTATATTTGGGGAATATACGAACCTCAATCAGATGATCAAAATATGAATGAAACACGGTTGCGTTCTTTAGCCAA
AACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACG
AGATTATATCAATTGGTGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATT
GCCGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACG
AGAAGAGTTTAACAAGCGATTGAACATAATACATCAAAAGTTAAACGATAATATTAGCAATATCAACACTATAGTTAAAG
ATGTTGTAGATGGTGAATTAGAATACTTTGAACACAAAATACACAAAAGTGATACACCGCCAGAAAATCCAGTCAATGAT
ATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGCAACACC
AAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATTTTTATTAATTTAT
CTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCG
GACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAAC
TGCAACGATTGGTCGGTTGGTAGATACACAAGCTTTATTTCTTGAGTATAGAAAGAAATTACAAGATGTTTATACAGATG
TAGAAGATGTCAAAATGGCCATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCG
TTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATC
AGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAG
ACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTA
AACGAATATCGAAACGGATTGGAAGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGAT
TAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATGATCTTAAAG
AGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTT
GAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAA
AGAAAGCACAGATGCACAGAGGAAAACATTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAA
GAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGAGATTGTCCAAAACGTTACAGAT
GGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTAAATGTGGGGCCACGTGGTATTAGATTAAATGCTGA
TAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTG
TCAACAGCCTTAATTTATCAAGAGAGGGTCTTGACATCAATGTGAATAGAATTGGTATTAAAGGCGGAAATGCTAACCGT
TATGTACAAGTTCAAAATGATTTTATTGAACTTGGCGGAATCGTACAACGAACTTGGAAAGGCAAACGATCAACCGATGA
TATATTCACACGTCTTAAAGATGGACATCTAAGGTTTAGAAATAATACCGCAGGCGGTTCACTTTATATGTCACATTTTG
GTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGT
GATAGCGGTATGAATGGCATAACAATCAATTCCTATGGTGGTGTCGTTGCACTAACGTCAGATAATAATCGGGTTGTTCT
GGAGTCTTACGCTTCATCGAATATCAAAAGCAAACAGGCACCGGTGTATTTATATCCAAACACAGACAAAGTGCCTGGAT
TAAACCGATTTGCATTCACGCTGTCTAATGCAGATAATGCTTATTCGAGTGACGGTTATATTATGTTTGGTTCTGATGAG
AACTATGATTACGGTGCGGGTATCAGGTTTTCTAAAGAAAGAAATAAAGGTCTTGTTCAAATTGTTAATGGACGATATGC
AACAGGTGGAGATACAACAATCGAAGCAGGGTATGGCAAATTTAATATGCTGAAACGACGTGATGGTAATAGGTATATTC
ATATACAGAGTACAGACCTACTGTCTGTAGGTTCAGATGATGCAGGAGATAGGATAGCTTCTAACTCAATTTATAGACGT
ACTTATTCGGCCGCAGCTAATTTGCATATTACTTCTGCTGGCACAATTGGGCGTTCGACATCAGCGCGTAAATACAAGTT
ATCTATCGAAAATCAATATAACGATAGAGATGAACAACTGGAACATTCAAAAGCTATTCTTAACTTACCTATTAGAACGT
GGTTTGATAAAGCTGAGTCTGAAATTTTAGCTAGAGAGCTGAGAGAAGATAGAAAATTATCGGAAGACACCTATAAACTT
GATAGATACGTAGGTTTGATTGCTGAAGAGGTGGAGAATTTAGGATTAAAAGAGTTTGTCACGTATGATGACAAAGGAGA
AATTGAAGGTATAGCGTATGATCGTCTATGGATTCATCTTATCCCTGTTATCAAAGAACAACAACTAAGAATCAAGAAAT
TGGAGGAGTCAAAGAATGCAGGATAA

Protein sequence :
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGY
TEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLD
FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYSKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLP
TRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDGELEYFEHKIHKSDTPPENPVND
MLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKA
DLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTQALFLEYRKKLQDVYTDVEDVKMAISDRFKLLQSQYTDEKYKEA
LEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTL
NEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDDLKEKESQAYADGKISEEEQRAIQDAQAKL
EEAKQNAELKARNAEKKANAYTDNKVKESTDAQRKTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTD
GTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNANR
YVQVQNDFIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYS
DSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDE
NYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRDGNRYIHIQSTDLLSVGSDDAGDRIASNSIYRR
TYSAAANLHITSAGTIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKL
DRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1916c YP_005737361.1 Structural protein, phage associated Not tested ¥ÕSa3 Protein 0.0 99
SAKOR_01930 YP_008492118.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 99
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
SAOV_1117 YP_005736612.1 Structural protein, phage associated Not tested ¥ÕSa2 Protein 0.0 99
MW1893 NP_646710.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 94
SAV1953 NP_372477.1 phi PVL ORF 20 and 21-like protein Not tested ¥ÕSa3 Protein 0.0 94
SA1764 NP_375062.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 91