Gene Information

Name : join (SAMSHR1132_15150)
Accession : YP_005326032.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Unknown
Product : transposase (fragment)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1674606 - 1675931 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
GTGAATCCAAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATCGA
TGATAATTCAATTTTTATTGATGGTACAAAAGTAGAAGCTAGTGCCAATAGGTATACATTTGTGTGGAAGAAAAGTATTC
AAAATCACGAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTTGGAGAAAAAAATTATAGACAATAA
AGAAGATGGAGATAGCGATTTAACAATAGAAGAAATTGATTTAATTGATAGTCATTTAGATAAAGAAATCGAAGATTTAA
ATCATTCTATTAAGAACGAAGATTGTGCTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAA
AATAAATTTGATGATTATTCTGAAAGAAAACGTTAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTC
TAAAACTGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATT
TACAAATAGCGACAAATTCTAAATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCA
TTTTTAACAATGATTCAAAATACCTTCGGTTTTTTACCAGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGTAAAA
CTATATGGCTATTATAGATGACTTTAATAATACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGT
TTAAAGGTGACATTTTCAATACTCAAAATTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGA
ATAGGTTTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAACTATATGAATGTGATGACTG
TTCAGCATGTTCTATGAGAAATCAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATTATGAAGAATTATAATTGGG
AATACTTTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGGTGTA
GAGCCTGTTTTTGGATTTATGAAGGCTATTTGGGGTTTCACTCGAATGTCAGTTCGAGGAAAAGTAAAGTTAAACGAGAG
CTAGGTTTTGTATTAATGGCACTTAATATAAGGAAAATAGCAGCTCGACGAGCTATATATTATCAAATACATTTGAAAAA
GCTGAATTCTATTAATTATTTGATAGAATTCAGCTTTTTACATTGA

Protein sequence :
MNPNTDALIESLFIQFHSQCLKQNLIDDNSIFIDGTKVEASANRYTFVWKKSIQNHESKLNENSKALYRDLVGEKKIIDN
KEDGDSDLTIEEIDLIDSHLDKEIEDLNHSIKNEDCAQIRKQTRKKRTEIKKFKNKFDDYSERKRYEEQKSILKDRNSFS
KTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSKFVLSYDLFQNPTDTRTLIPFLTMIQNTFGFLPEYIVADAGYGSENY
MAIIDDFNNTPLITYGMFIKDKTRKFKGDIFNTQNWKYDELNDEFICPNNKRIGFKRYAYRNDRYGFKRDFKLYECDDCS
ACSMRNQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIGVEPVFGFMKAIWGFTRMSVRGKVKVKREL
GFVLMALNIRKIAARRAIYYQIHLKKLNSINYLIEFSFLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 4e-154 80
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 3e-154 80
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 2e-154 80
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 3e-154 80
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 3e-154 80
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 4e-120 79
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 1e-120 79
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 1e-148 79