Gene Information

Name : SAMSHR1132_01240 (SAMSHR1132_01240)
Accession : YP_005324646.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 145446 - 146132 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence :
ATGTCAAAAAAGGAAAATACGACAACGACACTATTTGTATATGAAAAACCGAAATCTACAATTAGTGAAAAATTTCGGGG
TATACGCTCAAACATCATGTTTTCAAAAGCAAATGGTGAAGTAAAGCGTTTGTTAGTTACTTCTGAAAAGCCTGGTGCGG
GTAAAAGTACAGTTGTATCGAACGTCGCGATTACGTATGCTCAAGCAGGCTATAAGACTTTAGTAATTGACGGTGATATG
CGTAAGCCAACACAAAACTATATTTTTAATGAACAAAATAATAATGGATTATCAAATTTAATTATTGGTAGAACTACGAT
GTCAGAAGCAATTACATCAACAGAAATTGACAATTTAGATTTACTCACAGCAGGTCCTGTACCTCCTAATCCATCAGAAC
TAATAGCTTCTGAAAGATTTAAAGAATTAGTTGATCTTTTCAATGAACGTTATGACATTATTATCGTTGATACACCACCA
GTTAATACTGTGACGGATGCACAACTATATGCACGTGCCATTAAAGATAGCTTGTTAGTTATTGATAGTGAAAAAAATGA
TAAAAATGAAGTTAAAAAAGCAAAAGCGCTTATGGAGAAAGCAGGCAGTAACATTTTAGGTGTCATTTTAAACAAGACCA
AGGTCGATAAATCGTCTAGTTATTATCACTATTACGGAGATGAATAA

Protein sequence :
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDM
RKPTQNYIFNEQNNNGLSNLIIGRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIASERFKELVDLFNERYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSSYYHYYGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-73 64
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-62 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_01240 YP_005324646.1 capsular polysaccharide synthesis enzyme VFG1298 Protein 2e-101 99