Gene Information

Name : SAMSHR1132_12560 (SAMSHR1132_12560)
Accession : YP_005325777.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1401896 - 1402555 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCAAATTTTAATAGTAGAAGATGAACAAAATTTAGCAAGATTTATCGAATTAGAACTCACACATGAAAATTACAA
TGTTGATACAGAATACGATGGACAAGATGGTTTAGACAAGGCGCTTAGTCATTACTATGATTTAATTATTTTAGATTTAA
TGCTACCGTCGATTAATGGTTTAGAAATTTGTCGGAAAATAAGACAACATCAATCTACACCAATCATAATTATTACAGCT
AAAAGTGATACTTATGACAAAGTAGCCGGTCTTGATTATGGGGCAGATGACTATATTGTTAAACCGTTTGATATAGAAGA
ACTTTTAGCTAGAATTCGCGCTATATTACGTCGACAACCACAAAAAGATATTATTGATGTTAATGGTATAACGATTGATA
AAAACGCTTTTAAAGTTACTGTAAATGGTGCTGAAATAGATTTAACTAAGACGGAGTATGATTTATTATATTTACTTGCT
GAAAATAAAAATCACGTTATGCAGCGAGAGCAAATTTTAAATCATGTTTGGGGTTATAACAGTGAAGTTGAAACAAATGT
AGTTGACGTTTATATTAGATATTTACGTAATAAATTAAAACCATATGATCGCGATAAAATGATTGAAACCGTACGTGGCG
TAGGGTATGTGATACGATGA

Protein sequence : 
MTQILIVEDEQNLARFIELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGLEICRKIRQHQSTPIIIITA
KSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAILRRQPQKDIIDVNGITIDKNAFKVTVNGAEIDLTKTEYDLLYLLA
ENKNHVMQREQILNHVWGYNSEVETNVVDVYIRYLRNKLKPYDRDKMIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-33 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-33 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_002952.2859858.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_007622.3794948.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_003923.1003417.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_013450.8614146.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_002951.3238224.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_007793.3914065.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_002758.1121390.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_010079.5776364.p0 Protein 7e-90 99
SAMSHR1132_12560 YP_005325777.1 response regulator protein AE015929.1.gene1106. Protein 2e-74 85
SAMSHR1132_12560 YP_005325777.1 response regulator protein HE999704.1.gene1528. Protein 2e-48 54
SAMSHR1132_12560 YP_005325777.1 response regulator protein BAC0125 Protein 2e-32 43
SAMSHR1132_12560 YP_005325777.1 response regulator protein BAC0197 Protein 1e-30 43
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_014475.1.orf0.gen Protein 3e-28 41
SAMSHR1132_12560 YP_005325777.1 response regulator protein NC_005054.2598277.p0 Protein 3e-28 41
SAMSHR1132_12560 YP_005325777.1 response regulator protein BAC0308 Protein 3e-30 41
SAMSHR1132_12560 YP_005325777.1 response regulator protein DQ212986.1.gene4.p01 Protein 8e-29 41
SAMSHR1132_12560 YP_005325777.1 response regulator protein AF155139.2.orf0.gene Protein 4e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_12560 YP_005325777.1 response regulator protein VFG0596 Protein 5e-34 45
SAMSHR1132_12560 YP_005325777.1 response regulator protein VFG1563 Protein 8e-26 41