Gene Information

Name : SAMSHR1132_10050 (SAMSHR1132_10050)
Accession : YP_005325527.1
Strain : Staphylococcus aureus MSHR1132
Genome accession: NC_016941
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1117336 - 1118295 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACACGTACAGTCAGCTTAGTAACATCAACATTATTAGTAACTTCCATATTGTTAAATCCTATCGCTCATGCAGC
AGATAGTGATATAAATATTAAACCAGGAACAACAGATATTGGTAGCAATACGACAATTAAAACAGGTGATTTAGTCACTT
ATGACAAAGTAAATGGTTTGCACAAAAAAATATTTTATAGTTTTATTGATGATAAAAATCACAATAAAAAATTACTGGTT
ATTAGAACAAAAGGTACAATTGCCGGTCAATATAGAGTCTATAGCGAAGAAGGTTCAAATAAAAGTGGTCTGGCATGGCC
TTCTGCTTTTAAAGTACATCTAGAAATACCTGATAATGAAGCAGCACAAATCTCTGATTATTATCCGAGAAATTCAATTG
ATACGAAAGAATATATGAGCACTTTAAATTATGGTTTCAATGGCAGCATCAGTGCTGATGATACTGGGAAAATCGGCGGA
CAAATTGGTGGAACTGTCTCAATTGGTCATACTTTAAAATATGTGCAACCTGATTTCAAAACCATTTTAGAGAGCCCAAC
TGATAAAAAAGTAGGTTGGAAAGTTATTTTCAATAACATGATGAACCAAAATTGGGGACCATACGATAGAGATTCCTGGA
ACCCAATTTACGGAAATCAACTTTTCATGAAAACAAGAAATGGATCTATGAAAGCATCTGAAAATTTCCTTGACCCAAAC
AAAGCAAGTTCCCTATTATCTTCAGGTTTCTCACCAGATTTCGCTACAGTACTTGTGATGGACAGAAAAGCACAAAATCA
ACAAACAAACATTGATATCGTTTATGAACGTGTTCGTGATGACTACCAATTACATTGGACTTCAACAAATTGGAAAGGTA
CAAACACAAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGAAAAAAGAAGAAATGACTAATTAA

Protein sequence : 
MKTRTVSLVTSTLLVTSILLNPIAHAADSDINIKPGTTDIGSNTTIKTGDLVTYDKVNGLHKKIFYSFIDDKNHNKKLLV
IRTKGTIAGQYRVYSEEGSNKSGLAWPSAFKVHLEIPDNEAAQISDYYPRNSIDTKEYMSTLNYGFNGSISADDTGKIGG
QIGGTVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMMNQNWGPYDRDSWNPIYGNQLFMKTRNGSMKASENFLDPN
KASSLLSSGFSPDFATVLVMDRKAQNQQTNIDIVYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWKKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 4e-128 90
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 4e-128 90
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-128 90
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-128 90
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 2e-128 90
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 2e-128 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAMSHR1132_10050 YP_005325527.1 alpha-hemolysin VFG1293 Protein 9e-129 90