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Name : clpC (SGRA_0574) Accession : YP_005320897.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 581303 - 583846 bp Length : 2544 bp Strand : - Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGCCTGATAATCGCTTTTCTCCCAAAGTCAAAGAGGTCATTTCTTTCTCTAGAGAAGAAGCCCTTCGCTTTGGACACGA CCAAATTGGAACCGAACACCTTTTGCTCGGTATCCTTCAGGATGAACAGAGCCTGGCCGTTGCCGTCCTCCAATCTTTAG ATGTGGATGTTTCGGACTTGCGCCAAGCCATTGAAGATTCTGTCCAGAAAACACAACGCAGAGAACGCCCCTCTTACACA GTAGGCAATCTGCCCCTTACTCGCCAAGCCGAAAAGGTGCTTAAAATTACCTTTTTGGAGGCCAAACGCATGAAAAATGA ATTGGTCGGCACAGAGCATATTTTGCTCTCTCTTCTTAAGTATCCCGAAAATCTAGCTGCTCGTGTTTTGCAGGAGTTTG AGATTGATTATGATGGCTATAAGGCAGAGCTAGATTATTTGCTCGCCGAAAGCAATCCCAATTTGTTAGATGCCGCAGGT GGAGAAGATGAGTTTGAGGAAGAAGGAGGTAGCCGTGGAGGCAACCGTGGCCGTGCCGCTGGCGGAGCCGCCAAGGGCAA ATCACATACTCCCGTACTCGATAATTTTGGCCGAGATATTACCAAATTGGCCGAAGAGGATAAATTGGACCCCATTATTG GCCGCGAAAAGGAAATTGAACGCCTTTCGCAAATTTTGTCTCGCCGTAAAAAGAATAACCCTATTCTCATTGGAGAACCT GGGGTAGGAAAAACCGCTGTCGTAGAGGGTCTGGCCCTCCGCATTCAGCAGCGCAAAGTGTCTAGAACACTTTTTGACAA GCGCATTGTGATGTTGGACCTAGCTGCTTTGGTCGCCGGGACCAAATATCGCGGGCAGTTTGAAGAGCGGATGAAGGCCA TTATGACGGAACTAGAAAAATCTAGAGATGTCATCCTCTTTATTGATGAAATTCATACCATTGTAGGCGCTGGTGGGGCC ACAGGCTCGCTAGATGCTTCTAATATTTTTAAGCCCGCTCTTGCTCGTGGAGAACTCCAATGTATTGGTGCCTCTACCTT GGATGAGTACCGTCAGTACATTGAGAAAGATGGCGCCCTAGATCGTCGTTTCCAAAAAGTAATCATCGAGCCGCCTTCTC CAGAAGAAGCTATTCATATCTTGAGCAATATTCGAGAGAAATATGAGGCCTTCCATCATGTAGAATATACAGATGAAACC CTAGAGGCTTGTGTAAAACTTTCTGACCGCTATATCTCTGATCGTTTCTTGCCCGATAAGGCCATTGATGTGATGGATGA AGTGGGCGCTCGGGTACACCTCAAAAATATCCATGTGCCTAAGCACATTATGGAGCTAGAGGCTGAGATTGAACAAGTGA AGGAAGAAAAGAACCAAGCTGTTCGAGACCAAGAATATGAAAAAGCGGCCAACTTCCGCGATAGCGAGTCTAAGTTGATT CGTCAGCTAGAGCAGGCCCGCATTGATTGGGAGGAAGAGTCGAAGAGCAAGCGTTATCCAGTAACTATTGAAGACATTGC CGAGGTGGTGTCTATGATGACTGGAATTCCCGTAAGCAATGTAGCCGAAAGCGAAAGCGTCAAGCTATTGAGCATGGGCC AAGACCTCAAGGATAATGTAATTGGTCAGGATGAAGCCATCGTGAAGATTACCAAAGCCATTCAGCGGAACCGTGTGGGC CTAAAAGATCCGAACAAGCCAATTGGAACCTTTATTTTCCTCGGTCCAACTGGGGTGGGTAAAACAGAATTGGCCAAAGT ATTGGCTCGTCAGATGTTTGACTCAGAAGATGCCTTGATCCGCATTGATATGAGTGAATACATGGAGAAATTCTCTGTGA GCCGTCTTATTGGAGCGCCTCCCGGCTACGTAGGATATGAAGAAGGGGGACAATTGACGGAGAAAGTTCGTCGCAAGCCT TATTCTGTTATTCTTTTGGATGAGATCGAAAAAGCGCATCCCGATATCTTTAATATCTTGTTGCAGGTATTGGATGATGG CCAGCTAACCGATGGTTTGGGCCGCAAAGTGGACTTTAAAAACACTTTGATCATCATGACCTCAAATGTTGGGGTTCGTC GCTTGAAAGACTTTGGAACTGGAGTAGGTTTTTCTACTAAGGCCAGAGAAGAAGCTGCTGCAGATGAAGCCAAGGGCGTA ATTCAAAATGCACTCAAGCGGACCTTCTCTCCTGAGTTTTTGAACCGTATTGATGATGTGATTGTCTTTAACTCTTTGGG TAAAGAAGAAATCTTCAGAATCATTGATTTGAGTTTGAAAAACTTGTACAAGCGAGTAGAAGAGCTAGGCTACAAATTGC AATTGACCGATGAGGCCAAAGACTTTTTGGCTGAAAAAGGCTACGATCCGCAGTTTGGTGCTCGTCCATTGAACAGAGCA ATTCAAAAGTACTTGGAAGATCCTTTGGCGGAGTTTATTCTCAACCACAAAAATGAATTGGCAGAAGGCAGTTTGCTAGA AGCTAGTTTGAATAAAGAACAAGAGGTAGTGATTAGCATTTTCTCTGAAGAAGAAAGCAAGTAG Protein sequence : MPDNRFSPKVKEVISFSREEALRFGHDQIGTEHLLLGILQDEQSLAVAVLQSLDVDVSDLRQAIEDSVQKTQRRERPSYT VGNLPLTRQAEKVLKITFLEAKRMKNELVGTEHILLSLLKYPENLAARVLQEFEIDYDGYKAELDYLLAESNPNLLDAAG GEDEFEEEGGSRGGNRGRAAGGAAKGKSHTPVLDNFGRDITKLAEEDKLDPIIGREKEIERLSQILSRRKKNNPILIGEP GVGKTAVVEGLALRIQQRKVSRTLFDKRIVMLDLAALVAGTKYRGQFEERMKAIMTELEKSRDVILFIDEIHTIVGAGGA TGSLDASNIFKPALARGELQCIGASTLDEYRQYIEKDGALDRRFQKVIIEPPSPEEAIHILSNIREKYEAFHHVEYTDET LEACVKLSDRYISDRFLPDKAIDVMDEVGARVHLKNIHVPKHIMELEAEIEQVKEEKNQAVRDQEYEKAANFRDSESKLI RQLEQARIDWEEESKSKRYPVTIEDIAEVVSMMTGIPVSNVAESESVKLLSMGQDLKDNVIGQDEAIVKITKAIQRNRVG LKDPNKPIGTFIFLGPTGVGKTELAKVLARQMFDSEDALIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKVRRKP YSVILLDEIEKAHPDIFNILLQVLDDGQLTDGLGRKVDFKNTLIIMTSNVGVRRLKDFGTGVGFSTKAREEAAADEAKGV IQNALKRTFSPEFLNRIDDVIVFNSLGKEEIFRIIDLSLKNLYKRVEELGYKLQLTDEAKDFLAEKGYDPQFGARPLNRA IQKYLEDPLAEFILNHKNELAEGSLLEASLNKEQEVVISIFSEEESK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005320897.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 2e-159 | 53 |
| clpC | YP_005320897.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 52 |
