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Name : SGRA_4128 (SGRA_4128) Accession : YP_005324427.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Virulence Product : restriction enzyme type I helicase subunit; type I restriction enzyme HsdR Function : - COG functional category : - COG ID : - EC number : - Position : 4251007 - 4254117 bp Length : 3111 bp Strand : - Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGCCAAGCAAGACGAATGAACAGGCCTTAGAGGCGGCCATAGAAAAAGCCTTAACGGGTAGTAATTTAGAGGAGCTGAA AGCGCAGGGTTATGCGCCCCAGCAGATGGCGGAGGGGGAGATCCACTACCGTTCGGGCAATGGGTTTTATATAGGGGACC CTAATGATTATGATGCAAAATGGGCCATAGACAAGCGGCGTTTTTGGCATTTCTTAGAAAGCAGTCAGGCCGAGGAGTTG GCCAAGCTGCGCAAGCGGTCGGATGGGGAATTAAAGATCCTTCATCGCTTGAATGTGCTCATCAAGAAATATGGGGTTTT AGAACTGTTGCGCAAAGGGCTAGATGTTGATGATGCGCATTTTGAGTTATTGTATCCCTTGCCCTTAGCGAGTAGTGGGA AAAGAGTTCGGCAGCAGTTTGAGCAAAATGAGTTTAGTGTGAGTCGGCAATTGCGTTATTCACTAGATAAGCCCTTACAG GAAATAGACATGGTCATTTTTGTAAATGGTCTGCCTATAATTACGATGGAGCTCAAGAATCCTTGGACGGGGCAGAATGC TCGTTATCATGGGCAAAAACAGTATAGAGAAGACCGAGATATACGGCAGCCGCTTTTGCAATTTGGTCGTTGTTTGGTTC ATTTTGCGGTCGATACAGATGAGGTCTATATGACTACTCGTTTGGCGGGTAAAGGGACCTTCTTTTTGCCTTTTAATAAG GGGAATGGGCAAAGCAAGGGGAATCCCGTTAATGAGTTTGGGCATAAAACCGCCTATTTGTGGGAGCAAATTTTCAAGCG GGAGAGTTTGGCCAATTTGATTCAGCATTTTGTGCGCTTTGATGGCAAGCGAACGACTGCATTAAACAAGCGGACCTTAT ATTTTCCTCGTTTTCATCAGTTGGATGTGGTTCGTAAGATTGTGGCGGATATAGAAGCGGAAGGCCTGGGAAAAACCTAT TTGATTCAGCATTCGGCGGGTTCGGGAAAATCCAACTCTATAACTTGGGCGGCCTATCAGTTGATAGAGACCTACCCTAA GCATGAAAATGTTAGGGGATTTAGAGGAATGGAAAGGCCTTTATTTGATTCGGTTATTGTGGTAACGGATCGGCGTTTAT TAGATAAGCAAATTAGGGAGAACATTAAGAGTTTTTCTCAGGTCAAAAACATTGTTGCTCCAGCTTATCGCTCTGCAGAT TTGAAGGCGGCATTAGAGCTGGGGAAAAAGATTATCATTACGACCATACAAAAGTTTCCTTTTGTTTTGGAGGGAATTAG TCAGATGAATGAGAAGCAGTTTGCGGTAATTATAGATGAGGCGCATAGTTCACAGACGGGGACCACTGCAGACAAAATGA ATATGACTTTTGCCAAAACAGATGATAGCTTGGGCGATGCTCAGGACAAGCTATTTGATTTGATGTCTTCCCGTAAGATG CGGCAGAATGTTTCTTATTTAGCCTTTACGGCTACGCCAAAGAACTCGACCCTAGAAAAGTTTGGGGTTCGGCAGGCAGA TGGGAGTTTTAAGCCTTTTCATTTGTATTCTATGAAGCAGGCCATAGAGGAGGGCTTTATTTTAGATGTTTTGGCCAATT ACACGACCTACAAGAGCTACTATGAGCTACAAAAATCTATAGCGGAGAATCCCCTTTTTGATACCAAAAAGGCGCAAAAG AAATTGCGGAAGTATGTAGAGCGGCAAGAGCGGACAATAGCGACCAAGGCCGAGATTATGCTCAATCATTTTATGGAGCA AGTGCAGGCGAAGCGGAAGTTAAAGGGGAAAGGCAAGGCGATGGTCTTAACGCAGAGCATTGAGGCGGCTATTTTATATT ATCAGGCCATGCAGCGATTGTTGGAGCAAAAGGGGAACCCCTTCAGGATATTGGTTGCATTTTCTGGTAAAAAAATGTTG AAGGGTATAGAGTATACAGAAGAGCAGATCAACTATTTACCTGCCGAATTAGATCGGGCAAAGTCTTCGGACCCAGACTA CATCAGTGATAAGATTGCCCGTTATTTTGATATGGATGAATATCGGATATTGATTGTGGCCAACAAGTACCTTACAGGTT TTGATCAGCCCAAGCTTTGTAGTATGTATATTGATAAAAAGCTACAAGGGGTTTTGGCGGTACAGGCTTTATCGCGTCTG AATCGCTCGGCTAATAAATTGGGCAAGAAGACCGAAGATCTTTTTGTATTGGACTTCTTTAATAGTACAGAAGACATCAA AAAAGCCTTTGATGATTTTTATACCGCAACCAGTTTGTCTGAGGCTACAGATGTGAATATATTACATGAGTTAAAGGACC ATCTAGAAGACCCTGGGGTATATGAACTGGCCGAAGTAAAGGAGTTTACTAATTTATTCTTTGATAATGCTGATGCCCAG CTATTGAGTCCAATTATAGACCAGGCAGCTCATCGTTTTAATGAGGAGCTAGAACTTACCGATGAAGAAAAAGCAGACTA TAAAATTAAGGCCAAGCAGTTTGTTAAGATTTATGGGCAACTGGCTTCAATTATGGATATGGATATGGATTATAGCCGTT TGAATTGGGAGCAGCTATTTTGGTTCTTAAAGTTTCTTATTCCCAAGATGGTCATTAGGAATAAAGATAAGGACCAGCTA GACAGCTTATTGGATGCCGTAGATTTGTCTACTTATGGTATTGAGCGCGTAAAGCTCAATCATAAAATAGAATTGGATGC AGAGGAAACTAGCCTAAAACCTCAGAATGCCAACCCCAGAGGAGCTCATGAAGAAGAGGAAAAAGATACTTTAGAAGAAA TCTTGAGGATGTTTAATGAGCGCTGGTTTAAGGATTGGGGGGCTACCCCAGAGGAGCAGCGGATTCGTTTTGCCTCTTTT GGAGAGGGCATTTTGAACCACCCAGATTATAAGGATAAGGTTATGGAAAATCCCGATGCACAGAATAGGGATATGGCTTT CGATAAAATTATGAAAGAGGTCATGACGCATCATCGCAAACTGGATATTCAGCTCTATCGGAAGTTTGTACAAGATGAAG GTTTTGCTCAAGCCATTATTGATGGGCTGAAGCGCTATGTGGAGCAAGAGGCGATTAAGCGGAATATTTAG Protein sequence : MPSKTNEQALEAAIEKALTGSNLEELKAQGYAPQQMAEGEIHYRSGNGFYIGDPNDYDAKWAIDKRRFWHFLESSQAEEL AKLRKRSDGELKILHRLNVLIKKYGVLELLRKGLDVDDAHFELLYPLPLASSGKRVRQQFEQNEFSVSRQLRYSLDKPLQ EIDMVIFVNGLPIITMELKNPWTGQNARYHGQKQYREDRDIRQPLLQFGRCLVHFAVDTDEVYMTTRLAGKGTFFLPFNK GNGQSKGNPVNEFGHKTAYLWEQIFKRESLANLIQHFVRFDGKRTTALNKRTLYFPRFHQLDVVRKIVADIEAEGLGKTY LIQHSAGSGKSNSITWAAYQLIETYPKHENVRGFRGMERPLFDSVIVVTDRRLLDKQIRENIKSFSQVKNIVAPAYRSAD LKAALELGKKIIITTIQKFPFVLEGISQMNEKQFAVIIDEAHSSQTGTTADKMNMTFAKTDDSLGDAQDKLFDLMSSRKM RQNVSYLAFTATPKNSTLEKFGVRQADGSFKPFHLYSMKQAIEEGFILDVLANYTTYKSYYELQKSIAENPLFDTKKAQK KLRKYVERQERTIATKAEIMLNHFMEQVQAKRKLKGKGKAMVLTQSIEAAILYYQAMQRLLEQKGNPFRILVAFSGKKML KGIEYTEEQINYLPAELDRAKSSDPDYISDKIARYFDMDEYRILIVANKYLTGFDQPKLCSMYIDKKLQGVLAVQALSRL NRSANKLGKKTEDLFVLDFFNSTEDIKKAFDDFYTATSLSEATDVNILHELKDHLEDPGVYELAEVKEFTNLFFDNADAQ LLSPIIDQAAHRFNEELELTDEEKADYKIKAKQFVKIYGQLASIMDMDMDYSRLNWEQLFWFLKFLIPKMVIRNKDKDQL DSLLDAVDLSTYGIERVKLNHKIELDAEETSLKPQNANPRGAHEEEEKDTLEEILRMFNERWFKDWGATPEEQRIRFASF GEGILNHPDYKDKVMENPDAQNRDMAFDKIMKEVMTHHRKLDIQLYRKFVQDEGFAQAIIDGLKRYVEQEAIKRNI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SGRA_4128 | YP_005324427.1 | restriction enzyme type I helicase subunit; type I restriction enzyme HsdR | VFG1098 | Protein | 0.0 | 62 |
