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Name : SGRA_3845 (SGRA_3845) Accession : YP_005324145.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Resistance Product : beta-lactamase Function : - COG functional category : - COG ID : - EC number : - Position : 3952395 - 3953780 bp Length : 1386 bp Strand : + Note : COG0491 Zn-dependent hydrolases, including glyoxylases DNA sequence : ATGTTTTTTAAGCACATTTATGATAAAAGCTTAGCTCAAGCTAGCTATATGATCGCTTGTCAAAAAGCAGGCGTGGCCGC CGTAATCGATCCTAAACGGGATGTAGATACTTATCTAGATATTGCCAAGCAAGAGGGCTTTACGATTACGCATATCCTAG AAACACATATTCATGCAGACTTTTTGGCCGGTAGCCGAGAATTGGCCGAACTAACTGGAGCCAAAATGTATCTCTCCGCT GAAGGTGGCGAGGGCTGGGAATATGAGTTTCCGCATGAAGGCTTAAAAGATGGTGACGAATTTTGGTTGGGGAACCTCAA GTTTGAGGTTTGGCATACGCCTGGCCATACCCCAGAAAGTATCAGCTTCTTACTCAGCGATACGCCCGCAACGGAAGAAC CCGTTATGCTCTTTACTGGAGATTTTGTCTTTGTTGGCGATATCGGACGACCCGATTTGTTGGAAAAAGCCGCAGGGATC AAAGGTACTCAAGATGAAGGGGCCAAGCAAATGCTGGCTTCTGTCCGCCGATTCAAAGAATTGCCCGATTTTATTCAGCT TTGGCCCGGCCATGGCGCCGGCTCTGCCTGTGGTAAGGCCCTTGGTGCCGTACCTAGCAGTACTGTAGGCTATGAGAAAA TCCGCAACTGGGCCTGCCAATTAGCCGATGACGATAAAGCATTTACCGATTATCTGCTAGAGGACCAACCCGAGCCGCCA AAGTATTTTGCCAAAATGAAGTTGCTCAATAGAGTAGAACGCCCTCTATTAACCCAATTGGCCCCCGCTCAAGAACTCGA TTGGCAGACCGTAGCCACCGCTATGCAAGCGGGCATCCCTCTAATTGATGCGCGCCCCAGAACGCAGGTCGAAAAAGAGG GCTTTATTCCCGGCACGCTAAATATTCAGCATAATAATGCCTTTTCTACTTGGGCCGGCTGGTTCCTGGATTATGATAAG GACTTTATGCTTTTGGCCGCCGAGGACCAAATCGATGAGCTCCGCCGAAAACTTATGCGCATCGGCCTAGATAATTTCAA AGGATTTTTGCCTGCTACTGCGGCCTATCCGGAAGCCTTGCATCAACCCGATATTATTGAGCTAGCAGAAGTAAAAGCGC TAAAAGGAAAGTATCGTATTTTTGATATTCGCTCAGCCAAAGAATACAAAGAGGGCCATATTGAAGGCGCAGAACATTTC TTTTTGGGCAAACTTTATGAACTAGCCAAAGATGTAGACCGCAATGAAGCCATTATTCTACACTGTCAGGGCGGAGATCG TGCGGCTATTGGCTACAGTATTTTGGTCCAAATGGGCTTTAAGAATATTAAAAACTTTAGTGGCGGAATTAAGGCCTGGA CGGCTGCAAAAGAACCCTTGGTTTAG Protein sequence : MFFKHIYDKSLAQASYMIACQKAGVAAVIDPKRDVDTYLDIAKQEGFTITHILETHIHADFLAGSRELAELTGAKMYLSA EGGEGWEYEFPHEGLKDGDEFWLGNLKFEVWHTPGHTPESISFLLSDTPATEEPVMLFTGDFVFVGDIGRPDLLEKAAGI KGTQDEGAKQMLASVRRFKELPDFIQLWPGHGAGSACGKALGAVPSSTVGYEKIRNWACQLADDDKAFTDYLLEDQPEPP KYFAKMKLLNRVERPLLTQLAPAQELDWQTVATAMQAGIPLIDARPRTQVEKEGFIPGTLNIQHNNAFSTWAGWFLDYDK DFMLLAAEDQIDELRRKLMRIGLDNFKGFLPATAAYPEALHQPDIIELAEVKALKGKYRIFDIRSAKEYKEGHIEGAEHF FLGKLYELAKDVDRNEAIILHCQGGDRAAIGYSILVQMGFKNIKNFSGGIKAWTAAKEPLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV0046 | NP_370570.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-66 | 47 |
| SA0043 | NP_373283.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 7e-66 | 47 |
| unnamed | BAC57482.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 5e-66 | 47 |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 4e-83 | 43 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 3e-83 | 43 |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 1e-83 | 43 |
