|
Name : kdsB (SGRA_3784) Accession : YP_005324084.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 3896942 - 3897658 bp Length : 717 bp Strand : + Note : COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase DNA sequence : ATGAAAATTTTAGCTGTAATTCCAGCCCGCTACGCCTCTTCCCGTTTTCCTGGCAAGCCTTTGGCCGATATTGATGGCCA GCCCATGGTTTGGCGGGTCTATCAGCAGGCCCAAAAAGTAAATTGGACCAAATTAGTGGTCGCTACCGATGACGACCGCA TTTTTAATGCGGTGACTTCCCGAGGTGGCCTGGCCATGATGACCCGCCCAGATCATCCTTCGGGCAGCGATAGAGTAGGA GAGGTGCTGGCCAAATTGCAAGCGCAGGGAGAAGATTTTGATTTTGTGGTGAATATTCAGGGCGATGAACCCTTTATTCA GCCCGAACAATTGGAGGAACTCAAAGGAGCGCTACAACCAGGCGGCATTAGCAGCCTGATGAAAAAAATTGAGCAAAAAA CAATGCTCGAGGCGCCTCAGGTGGTTAAAGTGGTGGTCAATGCCCAACAGCAGGCCCTTTATTTTAGCCGTTTTCCCATT CCCTTTTTTAGAGGAGAGGAAAACCCCTTGGCCAAACACAATTACTACAAACATATTGGCCTCTATGGCTATGATGCCCA ATTATTGCCCAAGTTGTTGGCGCTCTCTCCCTCGGCCTTAGAACAGGCGGAGTCCCTTGAGCAGCTGCGCTGGCTAGAGG CGGGCTACCCCATTTATATGGCCGAAACGCAGTACGAAAGCCATGGCATTGATTATCCCGAAGACCTCAAGCGATGA Protein sequence : MKILAVIPARYASSRFPGKPLADIDGQPMVWRVYQQAQKVNWTKLVVATDDDRIFNAVTSRGGLAMMTRPDHPSGSDRVG EVLAKLQAQGEDFDFVVNIQGDEPFIQPEQLEELKGALQPGGISSLMKKIEQKTMLEAPQVVKVVVNAQQQALYFSRFPI PFFRGEENPLAKHNYYKHIGLYGYDAQLLPKLLALSPSALEQAESLEQLRWLEAGYPIYMAETQYESHGIDYPEDLKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-28 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-28 | 46 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-28 | 46 |
