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Name : hsdR (SGRA_0295) Accession : YP_005320618.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 284137 - 286947 bp Length : 2811 bp Strand : + Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases DNA sequence : ATGACGACGCAAACAGAACAAATACTAGAGAATGAATTGGTAGAGCAACTAATTGGCTTGGGCTATGAATATCTGCCCAT TAAGGAAGAAAGTGATTTAGTAGCCAATTTTAAGCGGCAATTGGAGCGCCTCAATGGAATTTCTTTGTCGGAAACAGAAA TGCAACGTTTGCTCCTGCAATTGAATCAGGGAAGTATTTTTGAGCGCTCAAAACGCTTGCGGGCCAAAAAACTGGAATTA CAAAAAGATGATCAAGAAACGATCTATTTGAGTTTGTGGGATCAAAAAAATTGGGCGGAAAATAAATTCCAATTGATTCG ACAAATGCGGATGGATGGACGCTATAAAAATATTTATGACCTGAATATTTTGATCAATGGGCTGCCCTTGCTGCATATTG AATTAAAACGGCGAGGCATCGAGATGAAAGAAGCCTTTAATCAGATTCATCGTTATAGCCATCAATCTTTTTTGATGGGC CAAGCTTTGTTCTCTTACACACAACTTTTTGTGATTTCGAATGGCGTAAACACTAAATATTTTGCGAACAACAAAACAGG CGAGCTCAATTTTAAGCAGACCTTTTATTGGGCCAATAAAGAAAACCAGAAAATTAGTCGCTTAGAAGAATTTGCGCAGC ATTTTTTGGCTCCGCCTCAGCTTTTTAAAATGATTAGCCGCTATATGGTGCTCTCCGAAGCAAATAAGCGCATTTTAGTG ATGCGACCTTATCAGTGCCATGCTACAGAAGCTATTGTAAATCGAGTGAAAAATAATGGGGGCAATGGATATATTTGGCA TACAACAGGCTCGGGAAAAACATTGACTTCTTTTAAAAGCAGCCAACTTTTGCAAGAGCTGCCCAAAGTGAAAAAAGTTG TTTTTGTTGTGGATCGCAAAGATTTAGATTATCAGACGATCAAAGAGTTTGATAGTTTTTCTAAAGATTGTGTGTCGGCT ACAGAAAATAGCAAGCAACTGATTCAACGTTTTTTGGGCCGAGACAAATTGATTGTTACGACCATTCAGAAGCTAAATTC CGTCATTCATAAAAAAAATAAGCGAGAACAACTCCTGCCCTTACAAGAGGAAGAAATGGTTTTCATTTTTGATGAGTGCC ATCGTTCGCAATTTGGAGAAAGTCATCGCCGAATCAAGGACTTTTTTAAAAAGGTGCAGCTTTTTGGCTTTACCGGCACG CCCATTCAGGCAAAAAACGCTATGGATACCAAATGGGGCAAACAAAGCACAAAAAATCTTTTTGATGAATGTTTGCATAG ATACATCATCACGGATGCTATTCGAGATGAAAATGTGCTTCGTTTTTTGGTGGAATATGTGGGGCGCTATAAAAAAACGG CCACGGCCAATGAAATCGACATTGAAGTAGAGGATATTGATCGCCAAGAATTGCTAGAGCATGAATATCGCTTGGAAAAA ATTGTCGACTATATTATTAAGTACCACCCCATTAAAACCAAAAATAAAAAGTACAATGCCATTTTTTGTCTGCCCAGCAT TCCCGTTTTAAATAAGTACTATGAAATTTTCAAGCGAAAAAAAGCCGAGGGCGCGCATGACTTAAATATTGCTTGCATTT TTAGTTATGGGAGCAATGAATCGCCTGAAGGACAGGATGAAACTCAGGATGGCTATACTTATCGGGGGCATAGTCGAGAT CGTTTAGAAGAAGCGATGATGGATTATAATGCGAGTTTTAATGCGAACTACAACAGCCAGAGCAGTCAATCTTTTGACAA TTATTATAAAGACATTGCAAAACGGCTGCGCGATGGGCAAATCGATATTTTATTGGTGGTCAATATGTTTTTGACTGGAT TTGACAGTCCGCGGCTCAATACCTTATATGTAGATAAAAATTTGCGCTATCATGGTTTGATTCAGGCTTTTTCTCGGACC AATCGTTTGATGGGCAGTGAAAAATCGCAAGGAAATATTGTTTGTTTTCGCAACTTAAAGCAGGCCACCGATGATGCGCT TCTTTTATATTCGGACAAAGACGCTCCGGAGCTGGCTTATAGTCCCAGTTATGAAGAACAGCGAGAAAAATTTGACGAGA AGGTCATGGCCTTAAAAAAATTGGTTCCGACTGTAGATTCGGTAGATTTTTTACCTTCGGAAGAGGAAGAGCTGGCTTTT GTGCAGGGTTTTCGGGAGTTAATTCGTTTGCAGAACATGCTTTCGGCCTTTGTCGATTTTGATTTGGAGCAAACGGCCAT GCAAGAGCAGGAGTTTGCGGATTATAAATCGAAATATTTGGACCTCTATGAAAAAGTTCGGCAAAATCGGAAGCTCAATA AAACTTCTGTTTTAGAAGAGGTTGATTTTGAGTTGGAATTGATTCAGCGCGATGAAATCAATGTCGTTTATATTTTGCAG CTTTTGCAAAAGGCTGCTTCAGCTTCGGCAGAAAAAAGAAGCTTGGCCATTGAGCGGCTGCTTCAGCAGTTGCAGGCAGA AGTCAGTTTGCGCAGCAAAAAAGATTTAATTGAGAAATTTATTCGGGACAACCTGCCAAAGATCGAAGAGGCCGATGATA TTCCCGATGCCTTTGAAGAATTTATGCGCAAGGAGCAAGCCGCTAGTTTTCAGGCGATTTGTCAGCAATATGATTTGGAC CAAGAAAAATTTGAGCAGCTGGTCAAAAACTATTTGTATAGCCAGAAAATGCCCTCTAGCGATCAATTACTCGCCAGCCG AAAAGAAAAACCTAAATTATTAGAGCGAAATAAAATTGCCCAGGGCATAAGAGAAGAGTTGGAGGGATTTGTTGGGCGGT TTATGGAGTAG Protein sequence : MTTQTEQILENELVEQLIGLGYEYLPIKEESDLVANFKRQLERLNGISLSETEMQRLLLQLNQGSIFERSKRLRAKKLEL QKDDQETIYLSLWDQKNWAENKFQLIRQMRMDGRYKNIYDLNILINGLPLLHIELKRRGIEMKEAFNQIHRYSHQSFLMG QALFSYTQLFVISNGVNTKYFANNKTGELNFKQTFYWANKENQKISRLEEFAQHFLAPPQLFKMISRYMVLSEANKRILV MRPYQCHATEAIVNRVKNNGGNGYIWHTTGSGKTLTSFKSSQLLQELPKVKKVVFVVDRKDLDYQTIKEFDSFSKDCVSA TENSKQLIQRFLGRDKLIVTTIQKLNSVIHKKNKREQLLPLQEEEMVFIFDECHRSQFGESHRRIKDFFKKVQLFGFTGT PIQAKNAMDTKWGKQSTKNLFDECLHRYIITDAIRDENVLRFLVEYVGRYKKTATANEIDIEVEDIDRQELLEHEYRLEK IVDYIIKYHPIKTKNKKYNAIFCLPSIPVLNKYYEIFKRKKAEGAHDLNIACIFSYGSNESPEGQDETQDGYTYRGHSRD RLEEAMMDYNASFNANYNSQSSQSFDNYYKDIAKRLRDGQIDILLVVNMFLTGFDSPRLNTLYVDKNLRYHGLIQAFSRT NRLMGSEKSQGNIVCFRNLKQATDDALLLYSDKDAPELAYSPSYEEQREKFDEKVMALKKLVPTVDSVDFLPSEEEELAF VQGFRELIRLQNMLSAFVDFDLEQTAMQEQEFADYKSKYLDLYEKVRQNRKLNKTSVLEEVDFELELIQRDEINVVYILQ LLQKAASASAEKRSLAIERLLQQLQAEVSLRSKKDLIEKFIRDNLPKIEEADDIPDAFEEFMRKEQAASFQAICQQYDLD QEKFEQLVKNYLYSQKMPSSDQLLASRKEKPKLLERNKIAQGIREELEGFVGRFME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 4e-180 | 43 |
