|
Name : SGRA_2737 (SGRA_2737) Accession : YP_005323049.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 2810568 - 2812883 bp Length : 2316 bp Strand : + Note : COG2183 Transcriptional accessory protein DNA sequence : TTGTTTACTGAACTTCAGCCAGACTGCATTCTTGGGCCAAAAGGAGGGGAGCAAGGAGAGCAGAATAACCGTCTTAGCAA AGCTCAAATCAGAAAATATGGGGCAAAAGTACGCTTTTCTGGCCCGCCAAACAAAAGGCGTTTGCAAGCTCCCCAAAAAG CCATTATCTTATGCCCCTTAACTCAAAGCGCTACTTTTATGATCGAACGTATTGCGAAACTGCTAAATATTCATGCTCAG GCTGTATCTAGAGTCATTGAGCTCTTTGAATCTGGGGCCACTATCCCCTTTATTGCTCGTTATCGAAAAGAGGCCAGTGG GGGCCTGAATGAGGTAGACCTCATGGCGATTAAAGACGAATGGGAAAAACAACAGGAAATAGAAAAGCGGCAGGCTTTTA TCCTAGAAAAAATTGAGGAGCAAGGCAAGCTAAGCGATGAGCTGGCCAAGAAAATTAAGAACTGCTTTGAGCTGCATCTG CTCGAAGATCTTTATTTGCCCTATAAGAAAAAGCGAAAAACCAGAGCCGATAAGGCCCGTGAGTTTGGTCTAGAGCCCTT GTCGGAGCTGCTTTGGGCCCAAAAAGATTTTGATCTAGATGCCATTGTAGAGCCCTTACTCTCTGAGGAAGTTTTGGATG AAGAGGATGCCCTAGAAGGGGCCAGAGATATTATTGCCGAGCGGATTAACCAAGATGAAAGAGCTCGGGCCACCGTTCGC CAGCATTATCAGAAGCGGGCTCGCTTTAAGGCGGAAGTGGTAGCGGGCAAAGAAGAAGAGGCCCAAAAATATAAAAACTA CTTCGAGCTGGACCGTCCGCTCAAGCAATTACAAGCGCATCAGATATTGGCTGTTTTGCGGGCCGAAAAAGAGGGCCTGC TCAAGGTCCAATTGGCCCCCAATGAAGATTATGTACTCAATGATCTTTGTGGGCAGTTTATCCGCAGAAGTTGCCCTGAT CGTTGGGCCGAACAACTGGATATGGCCATAGAAGATGCCTATAAACGGCTGATGAAGCCCTCTATTAGCAATGAGTTTGT GAAGCAAGCCAAGGCGCAGGCCGATTTGGCCTCCATACAGATTTTTGCCGATAACCTCCGCCAATTGCTGTTGGCCTCTC CCTTGGGCAACAAAAGAATGATGGCCATTGACCCTGGCTATGCCACCGGTTGTAAGCTAGTTTGTTTGTCGGCTACTGGT GAACTACTTGAAGATACCGTCATTTATCCCACACCACCTCGTAACCGCAAGTTTCAGGCTACCGATACGGTTTTGGACCT GATTGAAAAGCATCGGATAGAAGCGATTGCGATTGGGAATGGAACGGCAGGCCGAGAAACAGAGCAGTTTATTCGCCAAC TTCCCTTTGAGGGAACGCCCCCAGCCATTTTCTTGGTCAATGAAAGTGGGGCTTCTATTTACTCGGCTTCTGAAATTGCT CGCCAGGAGTTTCCCGATAAAGATATTACGGTTCGTGGAGCGGTTTCTATTGGGCGCCGTTTGATGGACCCCTTGGCCGA GTTGGTAAAAATTGATCCTAAATCTATTGGGGTGGGGCAGTACCAGCATGATGTGGACCAAAAACAGCTGCAAAATAAAT TGGGTGCGGTAGTCGAAAGCTGCGTAAATGCGGTAGGGGTGGACCTCAATACCGCCAGTGAATATCTACTTACCTATGTT TCGGGTTTGGGGCCTGCCTTGGCCCGCAACATTGTCGATTATCGCCGCTCGAAGGGGGCCTTTAAGAGTCGGCAAGAACT GCGCTCGGTTAAGCGCTTGGGCGAAAAAGCCTTTGAGCAGGCAGCGGGCTTCTTGCGCATTCGGAAAGGGATTCATCCAT TGGATAATACGGGGGTGCATCCAGAGGCCTATCCGATTGTAGAGCAGATGGCCAAGGATCTCAATGCCAGCATTGCGGAC CTTATTGCGGATAAGAGTTTGCGCAAAAAGATTCAGCTCAAAGATTATGTACAGGGTGAAATTGGGCTACCTTCTTTGCA TGATATTATGAAAGAGCTGGAGAAACCTGGCCGCGATCCTCGTCCGCCCCGCCAAGTTTTCCAGTTTGCCGATGTGCATC AGATAGAGGACCTCAAAGAGGGGATGAAGTTGCCGGGCATCGTGACTAATATTACGGCCTTTGGGGCTTTTGTGGATATT GGAATTAAGGAAAACGGGCTTTTGCATAAGTCTCAGATGAGCCATCAAAGAGTAGATGATCCTGGTCGCTTTGTGAAATT GGGCCAAGAGTTAGAAGTGACTATTGTGGGTTTGGAGCTAGGCCGCAAAAGGATCCAGCTCTCGATCATAGAGTAG Protein sequence : MFTELQPDCILGPKGGEQGEQNNRLSKAQIRKYGAKVRFSGPPNKRRLQAPQKAIILCPLTQSATFMIERIAKLLNIHAQ AVSRVIELFESGATIPFIARYRKEASGGLNEVDLMAIKDEWEKQQEIEKRQAFILEKIEEQGKLSDELAKKIKNCFELHL LEDLYLPYKKKRKTRADKAREFGLEPLSELLWAQKDFDLDAIVEPLLSEEVLDEEDALEGARDIIAERINQDERARATVR QHYQKRARFKAEVVAGKEEEAQKYKNYFELDRPLKQLQAHQILAVLRAEKEGLLKVQLAPNEDYVLNDLCGQFIRRSCPD RWAEQLDMAIEDAYKRLMKPSISNEFVKQAKAQADLASIQIFADNLRQLLLASPLGNKRMMAIDPGYATGCKLVCLSATG ELLEDTVIYPTPPRNRKFQATDTVLDLIEKHRIEAIAIGNGTAGRETEQFIRQLPFEGTPPAIFLVNESGASIYSASEIA RQEFPDKDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQKQLQNKLGAVVESCVNAVGVDLNTASEYLLTYV SGLGPALARNIVDYRRSKGAFKSRQELRSVKRLGEKAFEQAAGFLRIRKGIHPLDNTGVHPEAYPIVEQMAKDLNASIAD LIADKSLRKKIQLKDYVQGEIGLPSLHDIMKELEKPGRDPRPPRQVFQFADVHQIEDLKEGMKLPGIVTNITAFGAFVDI GIKENGLLHKSQMSHQRVDDPGRFVKLGQELEVTIVGLELGRKRIQLSIIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 5e-129 | 46 |
