Gene Information

Name : dnaB (SGRA_2716)
Accession : YP_005323028.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.4.12
Position : 2788319 - 2789851 bp
Length : 1533 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGAATTTTAATAAGACTGACCAAAAGAAAAATCTCAAGAGCTTCAAGCAAGCCCAAGGCAATAACGCCTTTGGCAAAGT
GCAACCCCAAGCCCCCGCCCTCGAAGAGGCCGTCTTGGGCGCACTCATGCTCGATAAAGATGCCCTGGCCATCGTCATCG
ATATCCTTTCTCCAGAAAGCTTCTATGTCGAACGCCACCAACATATTTATAAGGCCATCTGCAAACTCTTTGAAGATAGT
AATCCCGTCGATTTGCTGACCGTGACCGAAGAACTCCGCAAAATGGGCAAACTAGAGGCCGTAGGCGGCCCCTACCAATT
GGTAGAACTGACCAACCGCGTGGCCTCTTCCGCCAACGTAGAATATCACGCCCGCATCATTTCCCAAAAGTTTATCCAAA
GAGAACTCATTCGGGTGTCTACAGAAACCATCAATGAGGCCTATGAAGATACCGCCGATGTTTTTGACCTTCTCGATAAG
GCCGAACAAGGCCTCTTTGGCATTACCGAACAAAACCTCAGCCGAGGCTCTATGGGGATGAGTACCCTGGTCAATATGGC
CATCAAACAATTTGAAGAGCTATCGGAAAAAGAAGATGGACTGACCGGGGTGCCTTCTGGCTTTACCGCCCTCGACCGAG
TGACCTCTGGCTGGCAACCCAGTGATTTGGTCATCGTTGCCGCCCGTCCCGGTATGGGTAAAACCAGTTTCACCCTAGCC
GTGGCCAAAAATGCCGCCGCACAGTTTAGCTCGGGGGTCGCCTTTTTCTCTTTAGAGATGTCTAGCGTGCAGCTGGTCAA
TCGGATCATCTCTATGCAGACCCAAATCTCTTCAGAAAAACTCCGCAAGGGCCAACTCGAAGATTATGAGTGGCAACAAC
TCTATGCGCAGGTGGACCAATTGGGCAAAATGCCCATCTTTATTGATGATACCCCAGGGATTAGCATCTTTGAACTGCGC
GCCAAATGCCGCCGCCTCAAAATGCAACACGATATCCAACTCGTTATTATCGATTACCTCCAACTAATGACCGCAGGCGG
TGGCGATAAAAACGGAAACCGAGAACAAGAGATTTCAACCATCTCTCGTGGACTCAAGGCCCTGGCCAAAGAACTCAATG
TGCCCGTTATCGCCCTCTCGCAGCTGAGCCGTGCCGTAGAAACCCGTGGCGGCTCCAAACGCCCCATGCTTTCCGACCTT
CGGGAATCTGGTGCCATCGAACAAGATGCCGATATCGTGACCTTTATTTATCGCCCAGAATATTATGATATTCTAGAAGA
TGAAGAAGGTAACTCGCTTCAAAATATTGGCGAAATTATTATCGCCAAACACCGTAATGGTTCGCTAGAAACCGTTCGCC
TGCGCTGGGATGGCCAATATGCTCTCTTCTCTAATTTGGAGGACCAAGACTTTAATGGCCTACAACAAGCTGGCGGCAAT
TTCCAACTCCCCTCCAACCTAGGCGGCGAACCTAGCCCCCTTTCCTCTAAAATGAATAATGATAATGGCAGCATAGATGA
TATCCCCTTCTAA

Protein sequence :
MNFNKTDQKKNLKSFKQAQGNNAFGKVQPQAPALEEAVLGALMLDKDALAIVIDILSPESFYVERHQHIYKAICKLFEDS
NPVDLLTVTEELRKMGKLEAVGGPYQLVELTNRVASSANVEYHARIISQKFIQRELIRVSTETINEAYEDTADVFDLLDK
AEQGLFGITEQNLSRGSMGMSTLVNMAIKQFEELSEKEDGLTGVPSGFTALDRVTSGWQPSDLVIVAARPGMGKTSFTLA
VAKNAAAQFSSGVAFFSLEMSSVQLVNRIISMQTQISSEKLRKGQLEDYEWQQLYAQVDQLGKMPIFIDDTPGISIFELR
AKCRRLKMQHDIQLVIIDYLQLMTAGGGDKNGNREQEISTISRGLKALAKELNVPVIALSQLSRAVETRGGSKRPMLSDL
RESGAIEQDADIVTFIYRPEYYDILEDEEGNSLQNIGEIIIAKHRNGSLETVRLRWDGQYALFSNLEDQDFNGLQQAGGN
FQLPSNLGGEPSPLSSKMNNDNGSIDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-62 41