Gene Information

Name : SGRA_2276 (SGRA_2276)
Accession : YP_005322589.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Unknown
Product : KpsF/GutQ family protein
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.13
Position : 2308420 - 2309364 bp
Length : 945 bp
Strand : +
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence :
ATGTCTTATCAAGAAACTGCAAAATCGGTATTTGAGTTGGAGGCCAAGGCCCTTCAGCAACTTGGCCAAAAAATTAACAG
TCATTTTGATGGGGCTGTTCAGGCTATTCTCAATTGCTCGGGCCGCTTGGTGGTCTGTGGCATGGGCAAATCGGGCCTGA
TTGGGAAGAAGATTGCGGCGACTTTGGCCAGTGTGGGCCGCCCTAGCTTTTTTCTCCACCCTTCAGAGGCCATTCATGGC
GATTTGGGGATGCTGATGGAAAATGACTGCTTTTTGAGCCTTTCTAATTCGGGAGAAACGGATGAACTCTTGCAAATTTT
GCCTCATATTCAAGCGCTCGAGCTGCCGCATATTTGTATTGTGGGCCGCCCCAAATCAACCTTGGCCCGTTATGCCGACT
TTGTCCTAGATGTGGGCGTTTCGGTAGAGGCCGCCCGCCTGCAGGCGGTTCCCTTAGCCTCTAGCCTGACCGCCCTGGCC
ATGGGCGATGCCCTAGCCGCGGCCTATATTGAGGCCAGCAATTTCCAACAGGCCGATTTTTTGCGCTATCATCCTGGCGG
CAACCTCGGCAAGCGCCTGCTCACTAAGGTCCAAGAGGCCATGCAAAGCGAAAAATTGCCCCTTGTTGGTCCAAATACCA
ATATGCAAGAGCTACTATTGACGATTTCGGCTGGGCAGCTGGGCCTAGCCATTGTTCAGGAGGCCGGAAAAGTCTTGGGC
ATTATTACCGATGGCGATTTGCGCCGCCAACTGAGCCAAACGGCCAATGATGCCTTTTTTGCCCTGAAGGCCAAGGCCCT
AATGACGCCAAGACCCAAAACTATTTCTCCCCAAGCCTCTTTGCTCGATGCCGAGGAGCAAATGCAGCAGCTGAGAATCA
ACGCCCTTTTGGTCCTTGAAGAAGAACGCCTGCTGGGGATTATTGCCAAGCAACATCTTAAGTAG

Protein sequence :
MSYQETAKSVFELEAKALQQLGQKINSHFDGAVQAILNCSGRLVVCGMGKSGLIGKKIAATLASVGRPSFFLHPSEAIHG
DLGMLMENDCFLSLSNSGETDELLQILPHIQALELPHICIVGRPKSTLARYADFVLDVGVSVEAARLQAVPLASSLTALA
MGDALAAAYIEASNFQQADFLRYHPGGNLGKRLLTKVQEAMQSEKLPLVGPNTNMQELLLTISAGQLGLAIVQEAGKVLG
IITDGDLRRQLSQTANDAFFALKAKALMTPRPKTISPQASLLDAEEQMQQLRINALLVLEEERLLGIIAKQHLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 3e-43 41