Gene Information

Name : SGRA_2146 (SGRA_2146)
Accession : YP_005322460.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2158158 - 2158712 bp
Length : 555 bp
Strand : +
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
TTGAGACAGCGCCCAAAGCGTCAGCGTATTCGCAGAAAATTTGAACCTATCTCTTTGCCCAAGGAGGTAAATAAGGGTTG
GTCTATGGATTTTTTGAGCGATTGGGTCATGAGCTCAGATAAGAAATCGGTCCGAATTATCAACATTATGGATGAGACCT
CAAGGCGAGCTTTGTGGACAGAAGCCCATCAAAGTATCTCTGCAAAAAAGCTTACTGATGTACTTGATAAAGTACTGGAT
TACAGAGGTAAACCTGACTATATTCGTTGCGATAATGGGCCAGAATTCATCTCTAAAAAGTTAGCTGCTTGGGCCCAAAA
ACATGATATTGAATTAAAGTTCATCCAGCCAGGAAAACCTACCCAAAATGCATTTATTGAGCGATTAAATAAAACTTTGA
GAACAGAGTGTTTAAACTTATCTTGGTTCCACTCTTTAGAAGAACTAAATGAGGAAATTCAAAATTGGTTTCAGCACTAC
AATTTTAATCGTCCCCACCAAAGTCTGGGAAATATTAGCCTATATGACTTTGAAAGGACGATGTTAGATGTATAG

Protein sequence :
MRQRPKRQRIRRKFEPISLPKEVNKGWSMDFLSDWVMSSDKKSVRIINIMDETSRRALWTEAHQSISAKKLTDVLDKVLD
YRGKPDYIRCDNGPEFISKKLAAWAQKHDIELKFIQPGKPTQNAFIERLNKTLRTECLNLSWFHSLEELNEEIQNWFQHY
NFNRPHQSLGNISLYDFERTMLDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-26 43
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 3e-18 41