Gene Information

Name : galE (SGRA_1906)
Accession : YP_005322224.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Virulence
Product : NAD dependent epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.2
Position : 1916582 - 1917574 bp
Length : 993 bp
Strand : -
Note : COG0451 Nucleoside-diphosphate-sugar epimerases

DNA sequence : 
ATGTATCAAACCGCTTATCACGATCGAGACCTTAGCCAGTTTTCTGTACTCATTACTGGAGGCGCTGGCTTTATTGGCAG
CAATCTGGTCGAATATTTTTTGAAGTATGGGGCCAAAAAAGTCCGTGTTATTGATAATTTCCTCACGGGCTTCCGAGAAA
ACTTGGCGCCTTATATGGACCACCCCAATTTCGAGCTAATCGAAGGAGATATCTCCGTTTTGGCCGATTGCGAAAAAGCC
TGCGAAGGCATGGATGCCGTTTGCCATCAGGCCGCTTTGGGCTCGGTGCCCCGCTCTGTCGCCCAACCCCATCTTACGAC
TCTTCACAATGTCAATGGCTTTGTGAATATGGTGCATGCCGCCCATCAGGCAGGGATCAAGCGCTTTGTTTATGCCTCTT
CTTCCTCTGTTTATGGCGATGAGCCCAATTTGCCCAAAGTAGAAGACCGAATTGGGCAACAATTATCGCCTTATGCCATT
ACCAAATATAGCAATGAGCTATTTGCTAAAAACTTTGGCGATTTGTACGGAATGGAGTTCATGGGTTTTCGCTACTTTAA
TGTATTTGGACCAAAACAAAGCCCCAAAGGGGCTTATGCTGCCGTAATTCCTCTTTTTGCAGAGGCTTGTCTTTTGGGCA
AAACCGCTTATATTAATGGCGATGGCCTACAAACTCGAGATTTTACCTTTATCGAGAATGTGGTCCAAATGAATGTAAAG
GCACTCTTGACTGAAAATCCTGCAGCTTACAATCAGGTGTATAATGTGGGCGTAGGTGGCCGCTACTCGGTCCTAGATCT
TTATGAGGGCATCCGCAAAGCAGCTGGCAGCGAACAAGCTCCCGTACATCGAGAAAGCCGAGCAGGAGATATCCGTGATT
CTCAAGCGAATATTGAGAAAGCCAAAACGCTTTTGGAGTATAATCCACTCTTCAGCTTTGAGGAAGGCCTGGCCATTACG
GTCCAACATTTTAAACAGCTACTAAAGGCCTAG

Protein sequence : 
MYQTAYHDRDLSQFSVLITGGAGFIGSNLVEYFLKYGAKKVRVIDNFLTGFRENLAPYMDHPNFELIEGDISVLADCEKA
CEGMDAVCHQAALGSVPRSVAQPHLTTLHNVNGFVNMVHAAHQAGIKRFVYASSSSVYGDEPNLPKVEDRIGQQLSPYAI
TKYSNELFAKNFGDLYGMEFMGFRYFNVFGPKQSPKGAYAAVIPLFAEACLLGKTAYINGDGLQTRDFTFIENVVQMNVK
ALLTENPAAYNQVYNVGVGGRYSVLDLYEGIRKAAGSEQAPVHRESRAGDIRDSQANIEKAKTLLEYNPLFSFEEGLAIT
VQHFKQLLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-62 48
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-62 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galE YP_005322224.1 NAD dependent epimerase VFG0430 Protein 1e-62 48