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Name : SGRA_1893 (SGRA_1893) Accession : YP_005322211.1 Strain : Saprospira grandis Lewin Genome accession: NC_016940 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.3 Position : 1901656 - 1903176 bp Length : 1521 bp Strand : + Note : COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCAAGAAACAAATGTAATGGATGAAGTCCTAAAAGCTCCCGACTTCAAACCTCAATACGAAAACTTTATCAACGGAGA ATGGGTAAAACCTACCAATGGCGAGTACTTCGAAAATGTATCTCCCGTAGACGGTAAAAGCTTTACGCTTATCCCCCGCT CTACCAAAGAAGATATTGATAAGGCCGTAGCCGCCGCCTGGGCCGCCGCTCCAGAATGGAACAATAGCTCGGCCACTTTC CGTAGCAATATTCTACTCAAGATTGCCGACCGTATGGAGGAAAATCTTGAACTACTCGCTCGTACCGAAACTTGGGACAA TGGTAAGGCCATTCGCGAAACTCGCGCAGCCGATATGCCCCTAGCTATCGACCATTTCCGCTATTTTGCTGGCGTTATCC GCGCTGAAGAAGGTAGCATGAGCGAACTCGATGCTAATACAGTTTGTATCAATGTCCAAGAACCCCTAGGCGTAGTGGCC CAGATTATTCCCTGGAACTTCCCGCTCCTTATGGCTGCTTGGAAAATCGCTCCCGCTCTAGCCGCTGGTAACTGCGTAGT CCTTAAACCCGCAGAGCAAACTCCTGTAGGTATCCTAATTCTAATGGAGCTTATTCAAGATATTTTACCCAAAGGCGTGC TGAATGTAGTCAACGGTTTTGGCGTAGAAGCAGGTAAACCCCTAGCTTCTCACCCCGATGTACGCAAGGTGGCCTTTACC GGAGAAACGACTACCGGTCAGCTCATTATGCAGTATGCTTCTAAAAACTTGATTCCCGTTACTTTGGAATTGGGCGGTAA GTCGCCCAACGTTTTCTTCGCTAACGTGATGGCAGAAGATGATGCCTTCTTCGATAAATGCCTAGAAGGGGCCGCTATGT TTGCCCTCAACCAAGGAGAAGTTTGTACTTGCCCCTCCCGCATTTTGGTCCAAGAAAGTATCGCCGATAAGTTTATCGAA CGCCTAATCGAACGCGTCAACGCCATTAAGATGGGCCACCCCCTAGATCCTAACACCATGATGGGCGCACAAGCTTCTAA CGATCAATACGAGAAAATCCTCAACTATATCAAAATTGGTAAAGAAGAAGGTTGCGAAGTCTTGGCAGGTGGCGCCGCCG CTGCAGTAGATAGCCTCTCTGGTGGATACTATATCCGCCCCACTATCCTAAAAGGACACAACAAAATGAGAGTCTTCCAA GAAGAAATTTTTGGCCCAGTCGTTTGTATTACCACCTTTAAGGATGAAGCCGAAGCCGTAGAAATTGCCAATGATACCCT CTACGGACTAGGCGCTGGCGTATGGACACGCGATATGCACCAAGCTTACCAAATCTCTAGAAAAATTGAAGCCGGACGCG TTTGGGTCAATAACTATCACGCTTATCCCGCTCACGCTCCTTTTGGTGGCTATAAAAAATCCGGAATCGGACGCGAAAAT CACAAGATGATGCTCGCACACTATCGCCAAACCAAAAATATGCTCATCTCTTACGATAAGAACGCTCTCGGATTCTTCTA A Protein sequence : MQETNVMDEVLKAPDFKPQYENFINGEWVKPTNGEYFENVSPVDGKSFTLIPRSTKEDIDKAVAAAWAAAPEWNNSSATF RSNILLKIADRMEENLELLARTETWDNGKAIRETRAADMPLAIDHFRYFAGVIRAEEGSMSELDANTVCINVQEPLGVVA QIIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVGILILMELIQDILPKGVLNVVNGFGVEAGKPLASHPDVRKVAFT GETTTGQLIMQYASKNLIPVTLELGGKSPNVFFANVMAEDDAFFDKCLEGAAMFALNQGEVCTCPSRILVQESIADKFIE RLIERVNAIKMGHPLDPNTMMGAQASNDQYEKILNYIKIGKEEGCEVLAGGAAAAVDSLSGGYYIRPTILKGHNKMRVFQ EEIFGPVVCITTFKDEAEAVEIANDTLYGLGAGVWTRDMHQAYQISRKIEAGRVWVNNYHAYPAHAPFGGYKKSGIGREN HKMMLAHYRQTKNMLISYDKNALGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 6e-147 | 63 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-152 | 62 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-152 | 62 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-152 | 62 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 5e-152 | 62 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-73 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 3e-72 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SGRA_1893 | YP_005322211.1 | aldehyde dehydrogenase | VFG0082 | Protein | 3e-147 | 63 |
