Gene Information

Name : rplS (SGRA_1692)
Accession : YP_005322011.1
Strain : Saprospira grandis Lewin
Genome accession: NC_016940
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1719677 - 1720090 bp
Length : 414 bp
Strand : +
Note : COG0335 Ribosomal protein L19

DNA sequence :
ATGAAAAACTTGATTCAGTACGTAGAAGAGCAGACAGCCAGAGAGATGAGCCAGTTCGATTATTTCAAGGCTGGTGATAC
TGTGTCTGTCACTTATAAAATCATTGAAGGTCAAAAAGAACGGGAACAAACTTTCCGTGGCACCATTATCCAAGTTAAAG
GAACTGGTGTTACTAAAACTTTCACGATCCGCAAAATCTCGCACGGTGTAGGCATCGAGCGTATCTTCCCTTTCAACTGC
CCCACTTTGGTGAGCATCGTGAACCACCAAAAAGGCCGCGTTCGTCGCGCTCGCCTTTACTACCTTCGCAATGCTATCGG
AAAAGCTGGCCGCGTGAAAGAGAAAACTTTTGTTAAGCGTCAAACCGCTGAAGACAAAGGTCGTAAGTATAGCTGGACCT
TCGGAAACAAATAA

Protein sequence :
MKNLIQYVEEQTAREMSQFDYFKAGDTVSVTYKIIEGQKEREQTFRGTIIQVKGTGVTKTFTIRKISHGVGIERIFPFNC
PTLVSIVNHQKGRVRRARLYYLRNAIGKAGRVKEKTFVKRQTAEDKGRKYSWTFGNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-21 45
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-20 41