Gene Information

Name : MPD5_0476 (MPD5_0476)
Accession : YP_005319241.1
Strain : Melissococcus plutonius DAT561
Genome accession: NC_016938
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 539822 - 540286 bp
Length : 465 bp
Strand : +
Note : GI:332687036

DNA sequence :
ATGCCTAAAGGAGAAGGAAAGTTAATCGCACAAAACCGTAAAGCTAGACATGATTATTCAATCCTTGACACAATCGAGGC
AGGAATGGTTTTACAAGGAACTGAGATTAAATCGATTCGAAATAGTCGAATTAATTTAAAGGATGGATTTGTCCGTATTC
GAAATGGGGAAGCTTTTCTTTATAATGTTCATATCAGTCCATATGAGCAGGGAAATATTTTCAATCATGATCCACTTCGT
ACAAGAAAATTGTTAATGCATAAAAGGCAAATAAAAAGATTAATTGGTGAAACGAAAAATACAGGGATTACCTTGATTCC
ACTTAAGGTTTACTTGAAAGATGGCTATGCAAAGGTACTCGTTGGTCTAGCAAAGGGCAAAAAACAGTATGATAAGCGTG
AAACATTAAAACGAAGAGAAATAGATCGACAAATTAGTCGTACATTAAAAAATAAACAGCAATAG

Protein sequence :
MPKGEGKLIAQNRKARHDYSILDTIEAGMVLQGTEIKSIRNSRINLKDGFVRIRNGEAFLYNVHISPYEQGNIFNHDPLR
TRKLLMHKRQIKRLIGETKNTGITLIPLKVYLKDGYAKVLVGLAKGKKQYDKRETLKRREIDRQISRTLKNKQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-42 60
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-32 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-25 43