Gene Information

Name : MPD5_1596 (MPD5_1596)
Accession : YP_005320288.1
Strain : Melissococcus plutonius DAT561
Genome accession: NC_016938
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1802555 - 1805044 bp
Length : 2490 bp
Strand : -
Note : GI:332685809

DNA sequence :
ATGGATGAATTATTTACAGAAAGTGCAAAAAATGTCCTTGCAATTACTCAAAATGAAGTTAAATACTTTAAACAAAAATT
TGTTAGTTCTGAACATCTGTTATTAGCTCTAGTAACTGAAACAAATGGTATTGCTGGGAAGGTACTTCGTCAGTTAAATA
CAGATAAAATAGAATTAAAAGATGAAATTGAACATTTAACAGGATATGGCATAGTAGATAATTATTCTGATGAAACCTAT
CTGCCTTATTCTCCACGTGTAAAACAAATCTTTGCTTATGCTGGTGAAGAAGCTAAGCGTCTTGGATCCACCCACATTGG
TACAGAACATATTTTATTAGGGCTCCTTAGAGATGAAGATATTCTTGCTGCTAGAATTTTATTAAATTTGGGATTAAGTT
TATCAAAGATACGTCAATTACTATTAAAAAAAATGGGTGTTACAGATGCACAATTAAATAATGCTGCAAATCGTCGTAAC
ACTCAATTAGGACAAAGAAAGGCAACAAAGGGAACGCCTATATTGGATTCTTTGGCCAGAGATTTAACTAAATTAGCAAA
TGAAAATAAACTGGATCCTGTAATAGGCAGATCAAAGGAAGTCAGACGATTAATTCAAATATTAAGTAGAAAAACAAAAA
ACAACCCTGTTTTGGTAGGTGAACCTGGAGTCGGGAAAACCGCTATTGCAGAAGGATTAGCACAGCAAATTGTTAATGGT
GAAGTTCCTAGAGATATGCAGGATAAGCGATTAATGATGTTGGATATGGGGGCCTTAGTAGCGGGTACTAAATATCGTGG
TGAATTTGAAGATCGGTTAAAGAAAGTCATTGATGAAATTTATCATGATGGACAAGTGATTTTATTTATTGACGAATTGC
ATACATTGATTGGTGCTGGGGGTGCTGAAGGAGCAATTGACGCTTCAAATATTTTAAAACCAGCTCTAGCTCGTGGTGAA
TTGCAAACTATTGGTGCAACTACTTTAGATGAATATCAAAAATATATTGAAAAAGATGCAGCATTGGAAAGACGATTTGC
ACGTATTCAGGTAGATGAACCAACTACAGAGGAAGCTGAACAAATTTTAAAGGGATTATGTCCTCGTTATGAAAATCATC
ATGGTGTACGAATTACAGATGCGGCTTTACATGCAGCTATTCAACTATCAGTACGTTACATTAATGATCGACAATTACCT
GATAAAGCAATTGATTTAATGGACGAATCAGCAGCAAAAGTTCGTTTGGATAAGACAAATGAAACATCTAAAACACAAAA
ATTACAAGAAAAAATCGTACAAATCGTTGATGAAAAAGAGGCGGCAATTCAAGAGATTGATTTTGAAAAAGCGGCCCAAT
TGCATAAAAAAGAAAAGAACCTTCTAAAAGAACTTGATGATGCTTTTTTGATGGAAACAATGGACACAACAAGTTATAGC
AATCAGGTAACAGAAGAGGATGTTACAATAGTTGTTTCCCAGTGGACAGGAATTCCTTTGCAGCAATTAGAGAAAAAAGA
AAGTGAACGATTATTAGAATTAGAGTCTATTTTGCATAAGAGAGTTGTTGGACAAAATGAAGCAGTAAAAGCTGTTTCAA
AAGCTATTCGCCGAGCTAGAAGTGGCTTAAAAGATCCTAAACGACCAATTGGTTCTTTTATGTTTTTAGGTCCGACTGGT
GTAGGAAAAACAGAGTTAGCCAAAGCATTGGCTGAAGCAATGTTTGGTAGTGAAGATGCTCTTATTCGTGTCGATATGTC
TGAATTTATGGAAAGATACAATACGAGTCGTTTAGTCGGATCACCTCCAGGTTATGTTGGTTATGAAGAAGGTGGCCAAT
TAACAGAAAAAATTAGACAAAAACCTTATTCAGTTGTTTTATTAGATGAAATTGAAAAAGCACATACCGATGTATTTAAT
ATGCTTCTTCAAGTGTTAGATGATGGGCATCTAACAGATTCAAAAGGCAGAAAGATAGACTTTAGAAATACTATTGTAAT
TATGACTTCAAATATTGGTGCAACTGCTCTTCGGGATGAAAAAAATGTAGGATTTAATGTAAAAGATTTAAGTAGAGATC
ATCTTGCAATGCAAAAACGTATCTTAGATGAGCTAAAAAAGACCTGTAAACCAGAATTTTTAAATCGAATTGACGAAACA
ATTGTTTTCCATTCATTAAACAAAGAAGAAATACATGAAATTGTAAAAATCATGAGCTTATCCATTATTCAACGTATGAA
AGAACAAGATATTCATATTAAAATAACCCCTTCAGCAATTGATGTAATTGGTAATGCTGGTTTTGATAAGGAATATGGTG
CACGACCAATCCGAAGAGCTTTACAAAAAGAAATAGAAGATCGATTAAGTGAGGCACTTTTATCAGGACAAGTTCATTTA
GGCGATAAAATCACAATTGGAGCTAGTAAAGGAAAAATTACAATGACTATTCATAAATCGACTTCTGAAAAGGTTTTTCA
AACAACCTAA

Protein sequence :
MDELFTESAKNVLAITQNEVKYFKQKFVSSEHLLLALVTETNGIAGKVLRQLNTDKIELKDEIEHLTGYGIVDNYSDETY
LPYSPRVKQIFAYAGEEAKRLGSTHIGTEHILLGLLRDEDILAARILLNLGLSLSKIRQLLLKKMGVTDAQLNNAANRRN
TQLGQRKATKGTPILDSLARDLTKLANENKLDPVIGRSKEVRRLIQILSRKTKNNPVLVGEPGVGKTAIAEGLAQQIVNG
EVPRDMQDKRLMMLDMGALVAGTKYRGEFEDRLKKVIDEIYHDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGE
LQTIGATTLDEYQKYIEKDAALERRFARIQVDEPTTEEAEQILKGLCPRYENHHGVRITDAALHAAIQLSVRYINDRQLP
DKAIDLMDESAAKVRLDKTNETSKTQKLQEKIVQIVDEKEAAIQEIDFEKAAQLHKKEKNLLKELDDAFLMETMDTTSYS
NQVTEEDVTIVVSQWTGIPLQQLEKKESERLLELESILHKRVVGQNEAVKAVSKAIRRARSGLKDPKRPIGSFMFLGPTG
VGKTELAKALAEAMFGSEDALIRVDMSEFMERYNTSRLVGSPPGYVGYEEGGQLTEKIRQKPYSVVLLDEIEKAHTDVFN
MLLQVLDDGHLTDSKGRKIDFRNTIVIMTSNIGATALRDEKNVGFNVKDLSRDHLAMQKRILDELKKTCKPEFLNRIDET
IVFHSLNKEEIHEIVKIMSLSIIQRMKEQDIHIKITPSAIDVIGNAGFDKEYGARPIRRALQKEIEDRLSEALLSGQVHL
GDKITIGASKGKITMTIHKSTSEKVFQTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPD5_1596 YP_005320288.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0079 Protein 0.0 60
MPD5_1596 YP_005320288.1 ATP-dependent Clp protease ATP-binding subunit ClpC VFG0080 Protein 7e-145 49