Gene Information

Name : MPD5_1560 (MPD5_1560)
Accession : YP_005320255.1
Strain : Melissococcus plutonius DAT561
Genome accession: NC_016938
Putative virulence/resistance : Unknown
Product : 50S m3Psi1915 methyltransferase RlmH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1755469 - 1755948 bp
Length : 480 bp
Strand : -
Note : GI:332685847

DNA sequence :
ATGAGAATAAAAATTATAACAGTCGGCAAATTAAAGGAAAAATATCTGGTTCAGGGAATAAACGAATATTCAAAACGCTT
AATAAACTATGCAAAAATTGAAATAATAGAAGTTCCTGATGAAAAGGCTCCTGAGAAATTAAGTCATGCAGAAATGAAAC
AAGTCAAAGAAAAAGAAGGTAAAAAAATTTTAACTAAAATTAACGAACAAGACTATGTAATATCATTGACAATTGATGGA
CAACAGTTAACTAGTGAATTATTTGCTAAAAATATTGAACAATTGGGAATACATGGTCATAGTTCGATTGTTTTTGTAAT
TGGCGGTTCTCTTGGCTTAGACGAGGCAGTAATTAAATGTAGTGATCAACAACTTTCTTTTGGTAAATTAACCTATCCAC
ACCAATTAATGCGATTAATACTTATTGAACAAATTTACCGAAGTTTTCGGATTATAAAGGGAGAACCTTATCATAAATGA

Protein sequence :
MRIKIITVGKLKEKYLVQGINEYSKRLINYAKIEIIEVPDEKAPEKLSHAEMKQVKEKEGKKILTKINEQDYVISLTIDG
QQLTSELFAKNIEQLGIHGHSSIVFVIGGSLGLDEAVIKCSDQQLSFGKLTYPHQLMRLILIEQIYRSFRIIKGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0026 YP_300116.1 rRNA large subunit methyltransferase Not tested SCC15305RM Protein 1e-44 60
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 3e-44 58
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 3e-44 58
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 58
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 3e-44 58
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 4e-44 58
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-44 58
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 2e-44 58
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 3e-44 58
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 3e-44 58
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 3e-44 58
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 3e-44 58
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 5e-43 58
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 3e-44 58
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 3e-44 58
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 5e-43 58
orfXhom BAB83497.1 open reading frame X Not tested SCC 12263 Protein 3e-40 57
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 5e-43 57
unnamed ACL99851.1 hypothetical protein Not tested Type-V SCCmec Protein 3e-27 55