Gene Information

Name : MPD5_1391 (MPD5_1391)
Accession : YP_005320093.1
Strain : Melissococcus plutonius DAT561
Genome accession: NC_016938
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 4,6-dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : 4.2.1.-
Position : 1543810 - 1545624 bp
Length : 1815 bp
Strand : -
Note : GI:332686037

DNA sequence :
ATGTCAAGAAAGACAAAAGTACTTATATTATTAGCTGTAGATAGTTTGATTATTTTTTTTGTGAATCTTTTTTCTCATTT
TTATTTATTGTCTTATATAAAAATATCTTCCTCGTTATTTACAATGATAGTTCTAATAAATATTATTTTTTACTTATTCT
GGGGATTTGTTTTTAATGTGTTTACGCGAATTAATAGATATACCAATACAAAAGAAATTCGCGCAATTTTTTTAAGTATG
ACTGCTGCTTCAATTTGTGAATTTTTTTTACTTTTGTTATTAGATTTAAACGATGATTATCGTTTTGTACTACTCACCTA
TTTAGTAGCTAATTTTTTAATTATAACTAGTCGTTTAGTATGGTGTACGATCATAGAAGCTAAAAGTAAAAGCAAAGTAC
ATGGTAATCAAGTATATCCTAAACAAACATTGATTATAGGTGCAGGTGAAGCTGGACAACTTTTATTAAATAGTTTACAT
ACTTCTGCAAAAAATAGTGGAATTAAGGTGATTGGGTTAATTGATGATGCGCCAGATAAATACCATACTTACTTATCAGG
AGTTAGAGTATTAGGAAATACAAAACAAATTCCAAATATTATAAAAGATTATGATATTGAAATGTTAACTTTAGCAATAC
CTTCTATTCATCCTGAGCAATTAAAAAGAATTTTAGATATCATTACACCACTTGGCTTGCCTGTCAATTCGATGCCAGAT
TTAGAGGAAGTTGCCTCTGGAAATATTACAATTTCTAGGTTAAAAGAAATAGAGGTTGTAGATCTCTTAGGACGAGAAGA
GGTTCAATTAAATATTGAGCAAATTAAAGATCAATTATCAAATAAAGTTATTTTGGTTACAGGTGCCGGTGGTTCCATTG
GTTCTGAGATTTGTCGACAAGTAATGAAGTTTAATCCAGAAACATTAATTTTATTAGGACATGGGGAAAATTCTATTTAT
CTTATCGAAAAAGAACTACATAATACTTTCCAGCATGCTTCAACTGAAATTATTCCAATAATTGCTGATATTCAGGACAA
GCAACAAATGGTAGAAATTATGAAAAGATTTCATCCACAAATTGTTTATCATGCAGCCGCTCATAAACATGTTCCTTTAA
TGGAATACAATCCACAATCTGCTATTAAAAATAATATATTTGGTACAAAAAATACTGCTGAGGCTGCAAAAGCAGCAAAT
GTTGCTAATTTTGTTATGATTTCAACAGATAAAGCAGTAAATCCACCTAATATTATGGGAGCGACAAAACGAGTTGCTGA
ATTAATCATTACAAACTTAAATAAGACAGGGAATACAAAATTCTGTGCCGTTCGTTTTGGAAATGTACTTGGAAGTCGGG
GAAGTGTCATTCCCTTATTTAAAGAACAAATCAACAAAGGTGGTCCAATTACCATTACTGATTTTCGAATGACACGTTAT
TTTATGACTATTCCTGAAGCGAGTCGTTTAGTGATTCAGGTAGGTGCCTTGGCTAGAGGGGGAGAAATTTTTATTTTGGA
TATGGGTGATCCTGTGAAAATTATTGACCTAGCTAAAAATATGATTAAATTAAGCGGTTATAAAGAAAACGAAATTAAAA
TTATCGAAACAGGAAGTCGACCTGGCGAAAAATTATATGAGGAATTATTGGTAAATAAAAAGAAAAATCATAAACAGGTA
TTTGATAAGATTTTTATTGAAGATATTAGAGGTTCCTTTCCAGATGAGGTTTTACCATTTGTTGACAATTTATCAATGGC
CTCTAAATCTCTTGCAGAAGACATCATTCGTTTTGCCAATGCCTCAAGTCATTAG

Protein sequence :
MSRKTKVLILLAVDSLIIFFVNLFSHFYLLSYIKISSSLFTMIVLINIIFYLFWGFVFNVFTRINRYTNTKEIRAIFLSM
TAASICEFFLLLLLDLNDDYRFVLLTYLVANFLIITSRLVWCTIIEAKSKSKVHGNQVYPKQTLIIGAGEAGQLLLNSLH
TSAKNSGIKVIGLIDDAPDKYHTYLSGVRVLGNTKQIPNIIKDYDIEMLTLAIPSIHPEQLKRILDIITPLGLPVNSMPD
LEEVASGNITISRLKEIEVVDLLGREEVQLNIEQIKDQLSNKVILVTGAGGSIGSEICRQVMKFNPETLILLGHGENSIY
LIEKELHNTFQHASTEIIPIIADIQDKQQMVEIMKRFHPQIVYHAAAHKHVPLMEYNPQSAIKNNIFGTKNTAEAAKAAN
VANFVMISTDKAVNPPNIMGATKRVAELIITNLNKTGNTKFCAVRFGNVLGSRGSVIPLFKEQINKGGPITITDFRMTRY
FMTIPEASRLVIQVGALARGGEIFILDMGDPVKIIDLAKNMIKLSGYKENEIKIIETGSRPGEKLYEELLVNKKKNHKQV
FDKIFIEDIRGSFPDEVLPFVDNLSMASKSLAEDIIRFANASSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-106 50
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-108 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPD5_1391 YP_005320093.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG1300 Protein 7e-110 49
MPD5_1391 YP_005320093.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG0029 Protein 8e-74 41