Gene Information

Name : MPD5_1064 (MPD5_1064)
Accession : YP_005319784.1
Strain : Melissococcus plutonius DAT561
Genome accession: NC_016938
Putative virulence/resistance : Virulence
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1184590 - 1187196 bp
Length : 2607 bp
Strand : -
Note : GI:332686371

DNA sequence :
ATGAATATTGAAAAAATGACAACAGCATTACAAGAATCATTTGCTGAAGCGCAACAAATTGCAAATGTCCGTCATCACCA
AGAAATCGACATTGCACATTTGTGGAAAGTTTTTTTACAACCCAATCATTTTGGGCGAAATTTCTATGTGGATAGTGGCA
TAGATATAGATGCCTTTGAACAAGAAGTTGACAAAGTTTTAAATACCTATTCGAGTGTTGAAGGTAAAAATATTCAATAT
GGTCAAGTAATAAGTCAAAATTTATTTCGTTTACTAAATGAAGCAAATCAGTTAGCGATTGCTTTTCAAGACGATTATCT
ATCAACTGAAATCATGCTGCTTGCATTAATGCATTTAAAAGAGTATTCATTAACGAAATATTTATTACATAGTGGTATTA
ATGAAAAAACAATCAAACAAACAATTGAATCAATGAGAGGAGGAGAACGTGTGACTTCCCAAAATCAAGAAGAACAATAT
AAAGCTTTAGAAAAGTATGGAGTTGATTTAATCCAACAAATCAAAACTGGAAAACAAGATCCAATTATTGGTAGAGACGA
AGAAATACGGGATACTATTCGGATTTTATCTCGTAAAACAAAAAACAATCCCGTTTTAATTGGCGAACCGGGTGTTGGAA
AAACAGCTATTGTTGAGGGATTGGCTCAACGAATTGTCCGAAAAGATGTTCCTGATAATTTAAAAGATAAAACGATTTTT
TCTTTAGATATGGGAGCATTGCTTGCTGGTGCTAAGTATCGAGGTGAATTTGAAGAACGTTTGAAGTCTGTTCTTAAAGA
AGTTAAAAAAAGTGAAGGTCAAATTATTCTATTTATCGATGAAATTCATACGATTGTTGGTGCTGGAAAAACAGAGGGTA
GTATGGATGCTGGAAATTTATTAAAACCGATGTTAGCACGGGGAGAGCTTCATTTAATTGGTGCAACAACCCTAGATGAG
TATCGTCAATATATGGAAAAAGACAAAGCGTTAGAACGACGTTTCCAACGTGTATTGATCAAAGAACCTACAGTTGAGGA
TACAATTAGCATTTTACGTGGATTAAAAGAGCGGTTTGAAATTCATCATGGTGTAAATATTCATGATAATGCTTTGGTGG
CTGCAGCTAGTTTATCAAATCGTTATATTACGGATCGTTTCTTGCCTGATAAAGCCATTGATTTAGTCGATGAAGCTTGT
GCAACGATTCGAGTAGAGATGAATTCAATGCCTACAGAATTGGATCAGATAACCAGACGTTTAATTCAATTAGAAATTGA
AGAAGCAGCATTAAAGAAAGAGTCCGATTCTGCTAGTCAAAAACGTTTGGCTGTTTTACGAGCTGAATTAGCAGAACTAC
GTGAAGAGGCAAATACATTAAAAATGCAGTGGGAAACAGAGAAAGAAGAAATAAACAGTGTTAGTAGTAAACGAGCTGAA
ATTGAAAAAGCAAAGCACGCATTGGAAGAAGCAGAAAATAACTATGATTTAGAACAGGCAGCTGTTTTGCGCCATGGAAC
AATCCCTCAACTAGATAAAGAATTAAAAATACTTGAAGAAAAAAATCAAACGAATACTGCAAAATTGGTTCAGGAATCTG
TCACAGAAAACGAAATTGCTCAGGTAATTGGCCGATTAACTGGCATTCCAATCACCAAACTTGTTGAAGGAGAACGAGAA
AAATTAATCAAATTAAATGAAACACTTCATCAACGCGTTATGGGACAAAACGAAGCAGTCGATGCTTTAAGTGATGCCGT
CATTCGTGCACGTGCTGGGTTACAAGATCCAAATCGTCCGCTAGGATCTTTCTTGTTCTTAGGACCGACTGGTGTTGGAA
AAACAGAATTAGCAAAAGCTTTAGCAGAAAACTTATTTGATTCTGAAGAACATATGGTACGAATTGACATGAGTGAATAT
ATGGAAAAACATCATGTGTCTCGTTTGGTAGGTGCTCCTCCTGGTTATGTAGGTTATGAAGAAGGAGGTCAATTGACAGA
GGCAGTCAGACGTAATCCCTATACAATTATCCTATTTGATGAAATAGAAAAAGCTCATTCAGATGTCTTTAATTTACTCC
TACAGGTTCTTGATGATGGTCGCCTAACAGATTCAATGGGACGAATCGTTGATTTCAAGAATACTGTTTTGATCATGACA
AGCAATATTGGCTCTCAATTCTTGCTCGAGGGAGTTACCTCTGATGGAAAGATTTCTGATCATGCAAAAGAACAAGTGTT
AGCTCTATTGAAAGGTCAATTTAAGCCTGAATTTTTAAATAGAATTGATGATACCATTTTATTTACGCCTTTAAGTTTAG
CAGATGTTAAACAAATTATTGATAAAATGATTGAACAACTGGCAAAAAGACTTGAACAACAAGAAATTTTCCTAGATATT
TCTCTTGATGCTAAAACTTGGATTGCGGAGAAAGGCTATGATCCTATTTATGGTGCCCGACCATTACGACGATTCATTAC
AAAAGAGATAGAAACACCTTTAGCAAAAGAAATCATTTCAGGGAGTGTATTACCAAAAACGAAAGTAACAATTGCTTTAT
TAAACAATCAGTTGGTATTTCAAAATGTACCAATAAAAGAAGAATAA

Protein sequence :
MNIEKMTTALQESFAEAQQIANVRHHQEIDIAHLWKVFLQPNHFGRNFYVDSGIDIDAFEQEVDKVLNTYSSVEGKNIQY
GQVISQNLFRLLNEANQLAIAFQDDYLSTEIMLLALMHLKEYSLTKYLLHSGINEKTIKQTIESMRGGERVTSQNQEEQY
KALEKYGVDLIQQIKTGKQDPIIGRDEEIRDTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPDNLKDKTIF
SLDMGALLAGAKYRGEFEERLKSVLKEVKKSEGQIILFIDEIHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDE
YRQYMEKDKALERRFQRVLIKEPTVEDTISILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEAC
ATIRVEMNSMPTELDQITRRLIQLEIEEAALKKESDSASQKRLAVLRAELAELREEANTLKMQWETEKEEINSVSSKRAE
IEKAKHALEEAENNYDLEQAAVLRHGTIPQLDKELKILEEKNQTNTAKLVQESVTENEIAQVIGRLTGIPITKLVEGERE
KLIKLNETLHQRVMGQNEAVDALSDAVIRARAGLQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEY
MEKHHVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIILFDEIEKAHSDVFNLLLQVLDDGRLTDSMGRIVDFKNTVLIMT
SNIGSQFLLEGVTSDGKISDHAKEQVLALLKGQFKPEFLNRIDDTILFTPLSLADVKQIIDKMIEQLAKRLEQQEIFLDI
SLDAKTWIAEKGYDPIYGARPLRRFITKEIETPLAKEIISGSVLPKTKVTIALLNNQLVFQNVPIKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-98 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MPD5_1064 YP_005319784.1 ClpB protein VFG0079 Protein 2e-168 47
MPD5_1064 YP_005319784.1 ClpB protein VFG2076 Protein 2e-113 44
MPD5_1064 YP_005319784.1 ClpB protein VFG2084 Protein 5e-107 41