Gene Information

Name : PM3016_856 (PM3016_856)
Accession : YP_005310953.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1008658 - 1009392 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGGAGCGGATCAAGTTCCATTTTTATGACAATGAGGGCCGGTATGGAAGCCCCAAAATTACACATCTTCTAGGACTCGA
AGGATACAAAATAGCCGAACGGACTGTGGGCATCTACATGAAGGAACTGGGTCTGCGCTCTTGTGTTGCTCGCAAGTTCA
GAGTGATAACGACGGATTCGAATCATGATCATCCGATTGCCCCAAACATCTTGAACCAGGAGTTCAAAGTCGCTCAACCC
GGCAAGGTTTGGGTAGCCGATATTACTTACATCCCTTGCCGCGAGGGACGTTTATATTTAGCCAGCGTGTTGGGTCTCTG
TACCCGCGAAATCGTGGGATGGCGTCTCAGTGACCGGATGACGACAGACCTGGTGCTTGACGCTTTGAAGAACGCCTATG
CAGCCAAAAAGCCCAAGAAGGGGCTTATTCACCATTCTGATCGCGGTTCACAATATGCGTCTGCCGACTACAGAAAGCAG
CTCGCTGCATACAAGATGAAAGCCAGTATGAGCCGCAAGGGGAACTGTTACGACAATGCTTGTATTGAGTCGTTCCACAG
CGTGCTCAAGAAGGAGTTAATTTATTGTACCAAGTTCAAGACAAAGCAGCAGGCTTATAATGAGATCTTTGAGTATATCG
AATTCTTCTACAACCGAAAAAGAATTCATGGGGCTCTGGGCTACTTGTCACCAGTTCGCTTTGCTGCTCAAATTTCTACG
AAAAAAGCGGCATAA

Protein sequence :
MERIKFHFYDNEGRYGSPKITHLLGLEGYKIAERTVGIYMKELGLRSCVARKFRVITTDSNHDHPIAPNILNQEFKVAQP
GKVWVADITYIPCREGRLYLASVLGLCTREIVGWRLSDRMTTDLVLDALKNAYAAKKPKKGLIHHSDRGSQYASADYRKQ
LAAYKMKASMSRKGNCYDNACIESFHSVLKKELIYCTKFKTKQQAYNEIFEYIEFFYNRKRIHGALGYLSPVRFAAQIST
KKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 6e-42 49
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 6e-42 49
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-41 48
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-41 48
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-41 48
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-41 48
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-41 48
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-41 48
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-40 47
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-42 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-42 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-42 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-39 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 9e-39 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_856 YP_005310953.1 integrase catalytic subunit VFG1706 Protein 6e-42 48