Gene Information

Name : PM3016_7104 (PM3016_7104)
Accession : YP_005316832.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : LysS protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8328917 - 8330413 bp
Length : 1497 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGTTGAACTGGAATTGAACGAACTGCTTCAAATTCGACGCGGCAAGCTGGACGAGCTGAGATCTATGGGAATCGA
TCCGTTCGGTCAAAAGTACGAAAGAACACACCACGCCGCCGAGATTACCAAGGCCTATGAAGAGAAGTCCAAAGAAGAAC
TGGACGAGCTCAAGGCAGAGGTCAGCATTGCCGGCCGGATTATGCAGAAGCGGGAGATGGGGAAGGCCGGATTTGCCCAC
CTGCAGGACATTACAGGTAAGATCCAGATCTATGTGCGTGCGGACGCTGTAGGGGAGACTCCTTACAAAGCCTATGACCT
GCTCGACATCGGGGATATTATCGGTATTCGGGGAACGGTATTCAAGACGAAGACGGGAGAGCTTTCCGTGAAGGCCTCTT
CTGTCGTCGTTCTTTCCAAATCGCTGCTTCCTCTGCCGGAGAAGTACCATGGCTTGAAGGACGTGGAGCTTCGTTACCGC
CAGCGCTACGTCGACCTGATTATGAATCAGGATGTTCAGCAGACGTTCATCGCCCGTTCGAAGATCATTCAATCGATGCG
CCGCTACCTGGATGCCCTCGGCTATCTTGAGGTGGAGACGCCTACTCTGCATGCGATTGCCGGCGGTGCTGCCGCCCGTC
CGTTCATTACGCATCATAATGCGCTGGATATGCAGTTGTATATGCGTATTGCCATCGAGCTGCACCTGAAGCGCCTGATT
GTCGGCGGCATGGAGAAGGTGTATGAGATCGGCCGTGTTTACCGTAATGAGGGAATTTCCACGCGTCACAATCCGGAATT
CACGATGATTGAGCTGTATGAGGCGTATGCCGATTATAAGGATATCATGAAGCTGACGGAGGAAATGATCGCGCATATCG
CTCAGGAAGTGCTCGGCACTACAACGATTATGTACCAGGGCCATGAGGTCAACCTGGCTCCACAGTGGCGCCGTGTGACG
ATGGTCGATGCGATTAAGGAAGTGGTAGGCGTTGATTTCAGCGTGCAGATGAGCGACGAGGAAGCACACCGTCTGGCCAA
AGAGCATAAGGTTCCTGTAGAGCCTACCATGACCTTCGGCCATATTGTGAACCAGTTCTTCGAGACGTTCGTCGAGGAGA
CACTGATTCAGCCGACGTTCATCACGGGTCATCCGGTGGCAATCTCACCATTGGCCAAAAAGAGTGACGCCGATCCGCGT
TTCACGGACCGCTTCGAGCTCTTTATCGTGGCGCGTGAGCATGCGAATGCCTTCACGGAGCTGAACGATCCGATCGACCA
GCGGGAGCGTTTTGCCGCGCAGCTTGTGGAACGCGAGCAGGGCAATGACGAGGCGCATGAGATGGATGAAGATTTCGTCC
GTGCCCTGGAATACGGTATGCCGCCTACAGGCGGACTTGGCATCGGCATCGACCGGCTGGTCATGCTGCTTACAGATGCC
CCGTCGATTCGCGACGTACTGCTCTTCCCTCTGATGCGTGAGCGTCAGGGAGAATAA

Protein sequence :
MSVELELNELLQIRRGKLDELRSMGIDPFGQKYERTHHAAEITKAYEEKSKEELDELKAEVSIAGRIMQKREMGKAGFAH
LQDITGKIQIYVRADAVGETPYKAYDLLDIGDIIGIRGTVFKTKTGELSVKASSVVVLSKSLLPLPEKYHGLKDVELRYR
QRYVDLIMNQDVQQTFIARSKIIQSMRRYLDALGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYMRIAIELHLKRLI
VGGMEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMKLTEEMIAHIAQEVLGTTTIMYQGHEVNLAPQWRRVT
MVDAIKEVVGVDFSVQMSDEEAHRLAKEHKVPVEPTMTFGHIVNQFFETFVEETLIQPTFITGHPVAISPLAKKSDADPR
FTDRFELFIVAREHANAFTELNDPIDQRERFAAQLVEREQGNDEAHEMDEDFVRALEYGMPPTGGLGIGIDRLVMLLTDA
PSIRDVLLFPLMRERQGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-105 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_7104 YP_005316832.1 LysS protein VFG1668 Protein 1e-105 51