Gene Information

Name : PM3016_6874 (PM3016_6874)
Accession : YP_005316623.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8078582 - 8079409 bp
Length : 828 bp
Strand : +
Note : -

DNA sequence :
ATGACCGCCATTCAATCCAAAGACCTTTGCTTGTGTTACGGCGAGACCTGCATCTTCCAGGAGCTCAGCATCCGGATCCC
AAAGGGTAAAGTGACCGTGTTCATCGGCAGCAACGGCTGCGGCAAATCGACCCTGCTTCGCTCGCTCGCAAGGCTGCTTA
AGCCCCAGAAGGGCTCCATCGTCCTCGACGGCAATGAGATTTCGCGCATGTCGACCAAGGAGATCGCCCGCCGGATGGCC
ATGCTCCCTCAGGGGCCTGCCGCTCCGGATGGACTGACGGTGCTGCAGCTTGTGAAGCAGGGCCGTTATCCGTACCAGAA
CTGGCTCCAGCAGTGGAGCAAGGAAGACGAAACGATGGTCCAGCGGGCTCTCGAGCTGACGAACATGGCTCCGCTCGCGG
AGAGAACCGTCGATTCCCTGTCCGGCGGTCAGCGCCAGCGTGCATGGATCGCCATGACCCTGGCCCAGGGCACACCGACG
ATCCTGCTTGACGAGCCGACGACCTATCTCGACCTTGCGCATCAGATCGAAGTGCTCGACCTGCTGTATGAACTCAATGA
GCGGGAGCAGCGCACGATCGTGATGGTCCTTCACGACATCAACCTGGCCTGCCGGTACGCCGACAATATCGTCGCGATCA
AAGACCGCAAGGTGTGGGCCGAAGGACGTCCCGAGGATATCGTGAACGAGAAGCTCATCAAGGATGTGTTCGATCTCGAG
AGCAAGGTCATCGAGGACCCGCTGTTCGGCACGCCGATGATCGTCCCTGTCGGCAAAGGCAAACGGCCTGCAGCAGGCAA
GCTGCCGGTAAGACCCGTGGCCCTCTAA

Protein sequence :
MTAIQSKDLCLCYGETCIFQELSIRIPKGKVTVFIGSNGCGKSTLLRSLARLLKPQKGSIVLDGNEISRMSTKEIARRMA
MLPQGPAAPDGLTVLQLVKQGRYPYQNWLQQWSKEDETMVQRALELTNMAPLAERTVDSLSGGQRQRAWIAMTLAQGTPT
ILLDEPTTYLDLAHQIEVLDLLYELNEREQRTIVMVLHDINLACRYADNIVAIKDRKVWAEGRPEDIVNEKLIKDVFDLE
SKVIEDPLFGTPMIVPVGKGKRPAAGKLPVRPVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-60 54
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-64 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-64 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-58 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-58 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-58 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-58 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-49 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_6874 YP_005316623.1 hypothetical protein BAC0164 Protein 6e-52 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_6874 YP_005316623.1 hypothetical protein VFG0925 Protein 3e-62 48
PM3016_6874 YP_005316623.1 hypothetical protein VFG1042 Protein 6e-52 44