Gene Information

Name : PM3016_6741 (PM3016_6741)
Accession : YP_005316496.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7941466 - 7942209 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGTGGCTGAAAAAACGCATCCGGCATCACTTTTACCGTTTGAAGAAGCGCCCGGGCAGCCCCGTGATTACTGCGATTCT
GCGAGAGGAAGACGGTTGTGCTGTCTCCTCAAAAACGGTCAGTCGCCTTATGAAAGAGATGGGTCTTAAGTCGATTACGG
TTGGAAAATACAAAGCAACGACCAATTCCAACCACAACATGCCTGTTCATGACAATATCCTAAATCAGCAGTTTAAAGTG
GAGGCACCCAACAAGGTCTGGGTAACAGATATTACTTATGTCGCCACTGGCGAAGGCTGGCTATACTTAGCCAGTGTGAT
GGACTTATATTCACGTAAAATCGTGGGCTGGGCTACAGGCGCGCGGATGACTAGGGAGCTCGTGATCGAAGCCCTGGAGC
TTGCTTACAAGCGTCAGAAACCGGCCCCTGGCTTGATCCACCACTCCGACCGCGGATCTCAGTATGCAAGCAGTGATTAC
CAAGAACGGCTGGCAGACTACTTCATGACCGGCAGCATGAGTCGAAAAGGGAACTGCTATGACAATGCGTGTATCGAGTC
TTTTCACAGTACATTGAAAAAAGAGCTTGTGTACCAAACCAAGTTTAAAACTCGTAAACAAGCAACCGATGAACTCTATA
ATTACATCGAGTTTTACTACAACCGAACACGGCGCCACTCCACTTTGGGTTATAAAACGCCTCATCGCTTTGAACAGATG
TACCATGAACAAAGAGCAGCTTAG

Protein sequence :
MWLKKRIRHHFYRLKKRPGSPVITAILREEDGCAVSSKTVSRLMKEMGLKSITVGKYKATTNSNHNMPVHDNILNQQFKV
EAPNKVWVTDITYVATGEGWLYLASVMDLYSRKIVGWATGARMTRELVIEALELAYKRQKPAPGLIHHSDRGSQYASSDY
QERLADYFMTGSMSRKGNCYDNACIESFHSTLKKELVYQTKFKTRKQATDELYNYIEFYYNRTRRHSTLGYKTPHRFEQM
YHEQRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-48 53
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-48 53
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 7e-49 53
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 7e-49 53
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 2e-48 52
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-48 52
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 2e-48 52
unnamed AAF09030.1 unknown Not tested SHI-O Protein 2e-48 52
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-46 51
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-43 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-43 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-45 45
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-45 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-45 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-43 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-34 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 8e-35 41
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_6741 YP_005316496.1 integrase catalytic subunit VFG1706 Protein 7e-49 53
PM3016_6741 YP_005316496.1 integrase catalytic subunit VFG1631 Protein 6e-43 41