Gene Information

Name : PM3016_5959 (PM3016_5959)
Accession : YP_005315765.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Unknown
Product : protein PdhD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7057505 - 7058920 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGTAGGTGACGCATCGGTAGAAATTGACGTTCTCGTCATTGGTGCCGGTCCTGGCGGTTACGTTGCGGCCATCCG
TGCCGCCCAGCTGGGCAAGAGCGTGCTCGTAGTGGACAAGGCCGAACTCGGCGGCGTCTGCTTGAACCGCGGCTGCATTC
CATCCAAGGCGCTAATCAGCGCGGCCCATCAGTATGAAGTGGCCAAGCACGGCTCCTCTATCGGGATCACGGCTGATAAC
GTAGCCGTGGACTTCGCAAAGGTGCAGGAATGGAAGAACGGCATCGTGAAGAAGCAGACCGGCGGCGTAGGCATGCTGCT
GAAGGGCAACAAGATTCAGGTATTCAACGGCGAGGCGCTGTTCATCAACGAGCATGAAGCCCGCGTGTTCAACGATAACG
AAACGGCACGTTACAAGTTCAACTACTGCATCATCGCGACGGGCTCCCGTCCGATCGAGCTCAAGACGTTCCCGTTCGGC
GGACGCATCCTGTCCTCGACGGAAGCTCTGCAGCTCTCCGAGATTCCGAAGAGCATGGTCGTCATCGGCGGCGGCTACAT
CGGTATCGAGCTTGGCCAGACGTTCGCGAAGTTCGGCACGAAGGTGACGGTGCTTGAAGGCTCCGACCACATCCTGCCAG
GCTTTGAGAAGGACCTGTCTTCCCTGGTTGCACGCAACCTGAAGAAGCTTGAGGTGGAAGTAGTAACCGAAGCGATGGCG
CAGGGCTCCGAGCAGTCCGGCGACTCCGTAACGGTAACGTACACGGTCAAAGGCGAAGAGAAGAAAGTAACGGCGGATTA
TGTCCTCGTTACGGTCGGACGCCGCCCGAACACCGACGGCGATCTGTCCCTCGAACTTGCCGGCGTCGAAATCGGCGAGC
GCGGCCTGATCAAAGTCAACGAGAAGGGCCAGACGAACGTGCCTCACATCTACGCGATCGGCGACATCGTTCCAGGTCCG
GCACTGGCGCACAAAGCTTCCTATGAAGCGAAAGTGGCGGCAGAGTCGATCGCGGGACTGCCAAGCGTCGTAGACTACAA
GGTCATCCCGGCCGTAGTCTTCTCCGATCCGGAGATTGCCGGCGTAGGTCTCAGCGAGAGCGAAGCGAAGGCCAAAGGCA
TCAACACGGTTGTAGGCAAGTTCCCTTACGGAGCCAACGGCCGTGCCCAGTCGATGAACGCGACCGATGGCTTTGTGAAG
CTGATCGCGGACAAAGACACCGGCGTACTCGTCGGCGGATTCGTCGTAGGGGCGGAAGCCTCCAACCTGATTGCAGAGCT
GACGCTCGGCATCGAGATGGGCGCTACCCTCGAGGATATCGCTCTGACGATTCACGCTCACCCGACCCTGGGCGAGATCA
CGATGGACGCCGCCGAAGGCGCGCTCGGCCATCCGATTCACCAGCTCGGCAAGTAA

Protein sequence :
MVVGDASVEIDVLVIGAGPGGYVAAIRAAQLGKSVLVVDKAELGGVCLNRGCIPSKALISAAHQYEVAKHGSSIGITADN
VAVDFAKVQEWKNGIVKKQTGGVGMLLKGNKIQVFNGEALFINEHEARVFNDNETARYKFNYCIIATGSRPIELKTFPFG
GRILSSTEALQLSEIPKSMVVIGGGYIGIELGQTFAKFGTKVTVLEGSDHILPGFEKDLSSLVARNLKKLEVEVVTEAMA
QGSEQSGDSVTVTYTVKGEEKKVTADYVLVTVGRRPNTDGDLSLELAGVEIGERGLIKVNEKGQTNVPHIYAIGDIVPGP
ALAHKASYEAKVAAESIAGLPSVVDYKVIPAVVFSDPEIAGVGLSESEAKAKGINTVVGKFPYGANGRAQSMNATDGFVK
LIADKDTGVLVGGFVVGAEASNLIAELTLGIEMGATLEDIALTIHAHPTLGEITMDAAEGALGHPIHQLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-116 55