Gene Information

Name : PM3016_5670 (PM3016_5670)
Accession : YP_005315505.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6698393 - 6699217 bp
Length : 825 bp
Strand : -
Note : -

DNA sequence :
ATGTGCTCCGTGTTACAAGTATCCAGAAGCGGTTATTACAAGTGGGTAAAACACAAGCCTAGTAAACGGGAAAAGCACCG
GAAGTGGCTGAAAAACCGTATCCGGCATCACTTTTTCCGTTTGAAGAAACGCCCGGGCAGCCCCGTAATTACTGCAATTC
TGCGAGAGGATGACGGTTGTACTGTCTCCTCAAAAACGGTCAGCCGCCTAATGAAAGAGATGGGTCTTAAGTCAATTACG
GTTGGAAAATACAAAGCAACGACCAATTCCAAACACAACATGCCTGTTCATGACAATATCCTAAATCGGCAGTTTAAAGT
CGATGCGCCAAACAAGGTCTGGGTAACAGATATTACTTATGTCGCCACTGGCGAAGGCTGGTTATATCTAGCCAGTGTGA
TGGACTTATTTTCACGTAAAATCGTAGGCTGGGCTACAGGTGCACGGATGACTAGGGAGCTGGTGATCGATGCCCTGGAG
CTTGCTTACAGGCGTCAGAAGCCGGCCCCTGGCTTGATCCACCACTCCGACCGCGGATCTCAGTATGCAAGCAGTGATTA
CCAAGAACGGCTGGCAGGCTACTTCATGACGGGCAGCATGAGTCGAAAAGGTAACTGCTATGATAATGCGTGTATTGAGT
CGTTCCACAGTACATTGAAAAAAGAGCTTGTGTACCAGACCAAGTTTAAAACTCGCAAACAAGCTACCGATGAACTCTAT
AATTACATCGAGTTTTACTATAACCGAACACGGCGTCACTCCACTTTGGGTTATAAAACGCCTCATCGCTTTGAACAGAT
GTACCATGAAAAAAGAACAGCTTAG

Protein sequence :
MCSVLQVSRSGYYKWVKHKPSKREKHRKWLKNRIRHHFFRLKKRPGSPVITAILREDDGCTVSSKTVSRLMKEMGLKSIT
VGKYKATTNSKHNMPVHDNILNRQFKVDAPNKVWVTDITYVATGEGWLYLASVMDLFSRKIVGWATGARMTRELVIDALE
LAYRRQKPAPGLIHHSDRGSQYASSDYQERLAGYFMTGSMSRKGNCYDNACIESFHSTLKKELVYQTKFKTRKQATDELY
NYIEFYYNRTRRHSTLGYKTPHRFEQMYHEKRTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-57 49
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-57 49
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 4e-57 49
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 4e-57 49
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-56 49
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-56 49
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-57 49
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 7e-57 49
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 8e-55 48
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-47 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-47 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-47 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-45 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 7e-45 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-45 41
tnpB CAB61574.1 transposase B Not tested HPI Protein 4e-34 41
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_5670 YP_005315505.1 integrase VFG1706 Protein 4e-57 49