Gene Information

Name : PM3016_4423 (PM3016_4423)
Accession : YP_005314336.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5256560 - 5257294 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence : 
ATGCGGCAAGGGGAACGGCTCAAAAGTATACTGCTCGTCGAAGACGACATGGATCTCGGTGAGCTCCTGCGCGACTGCAT
GGAGCGGGACGGACTGCAGGTCGTCTGGTGCCGCGACGGAATCGAGGCGAGAGAGCGGCTGACGCGCGGTGCAGCGGACG
GGTATGATCTGGCCGTGCTCGATCTCATGCTGCCCGGCGCCGACGGGCTGGAGCTGCTGCGGCTTATCCGCCAGGCAGGC
TCCCTTCCGGTGCTGATGATCTCCTGCCGCGGGGAGGAGACCGATAAGATCGTCGGCCTGCGGATGGGCGCCGATGATTA
TTTGGCGAAGCCGTTCGGGCTCGGGGAGTTCGCCGCCCGGGTCCATGCGATGCTTCGCAGGTATCTGGATTTCGGTGCTC
CGCAGCAGCCTAATCCGTGGCTGGAGCAGCGGGGGATCCGGCTCAATACCGAGACCTACGAGGTCTATGTGGGCGGCAGG
GAAGTCGCTTTAACCGGGAAAGAATTCGAGCTCCTGAAGGTGTTCCTGGCCCAGCCGAAGCGTGTCTACTCGAAGGCACA
GCTCTTCCGGGCCGTATGGCAGCAGGAGTATCTGTATGATGAGAATACGGTCATGGTCCATATCCGGAGGCTGAGGTCCA
AGATCGAGCCGGAGCCTTCCCAGCCCCGATACATTCAGACCGTCTGGGGCATCGGCTACAAGCTCGGCGGCTGCGGGGAG
GGCGAAGGCGCGTGA

Protein sequence : 
MRQGERLKSILLVEDDMDLGELLRDCMERDGLQVVWCRDGIEARERLTRGAADGYDLAVLDLMLPGADGLELLRLIRQAG
SLPVLMISCRGEETDKIVGLRMGADDYLAKPFGLGEFAARVHAMLRRYLDFGAPQQPNPWLEQRGIRLNTETYEVYVGGR
EVALTGKEFELLKVFLAQPKRVYSKAQLFRAVWQQEYLYDENTVMVHIRRLRSKIEPEPSQPRYIQTVWGIGYKLGGCGE
GEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-31 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4423 YP_005314336.1 winged helix family two component transcriptional regulator AF162694.1.orf4.gene Protein 1e-34 41
PM3016_4423 YP_005314336.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 6e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4423 YP_005314336.1 winged helix family two component transcriptional regulator VFG1563 Protein 9e-32 42
PM3016_4423 YP_005314336.1 winged helix family two component transcriptional regulator VFG1702 Protein 7e-31 41