Gene Information

Name : PM3016_4213 (PM3016_4213)
Accession : YP_005314138.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5007985 - 5008680 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAGAATCCTGATCATTGAAGATGATCCGTATATTGCTGAGCTTCAGAAGGATTACCTGCAGCTGAATGATTTTGA
GGTGGATGTGACCGGCGACGGCGATGACGGCCTGGCGAAAGCGCTGGGCGGAGGGTATGACCTGTTGATCGTAGACCTGC
AGCTTCCCGGCACGGACGGCTTCGGCATCTGCCGCAAGGTGCGCGAGAAGCTCGATATCCCGGTGCTGATCGTGTCTGCG
AAGAACGAGGAGATCGACAAGATCCGCGGCTTCGGGCTCGGGGCCGACGATTTCGTGACGAAGCCCTTCAGTCCGGGCGA
GCTGGTGGCGAGGGCCAAAGCCCATTTGTCCCGGTATGAACGCTTCCTGGGCGGAGGGCGGCAGGCCGCGGGGCCGGAGG
TGATCCAGATCCGGGAGCTGTCGATTCATCCGGAAGCCCACCGGGTGTACGTGCACGGCAGGGAAGTGACGCTGACGACG
AAGGAGTTCGAGGTGCTGCTCTTCTTCGCGACCCATCCGAACCGGGTGTACAGCAAGGAAGCGCTGTTCGAGCACATCTG
GGGGCTGGAGTCGAGCGGGGAGATTGCGACGGTCACGGTGCATATCTCCAGGATCCGGGAGAAGATCGAAGGGGACCCGG
CCAATCCGCAGTTCATCGAGACGGTCTGGGGCGCAGGCTACCGGTTTAATGTGTAA

Protein sequence : 
MKRILIIEDDPYIAELQKDYLQLNDFEVDVTGDGDDGLAKALGGGYDLLIVDLQLPGTDGFGICRKVREKLDIPVLIVSA
KNEEIDKIRGFGLGADDFVTKPFSPGELVARAKAHLSRYERFLGGGRQAAGPEVIQIRELSIHPEAHRVYVHGREVTLTT
KEFEVLLFFATHPNRVYSKEALFEHIWGLESSGEIATVTVHISRIREKIEGDPANPQFIETVWGAGYRFNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-37 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 4e-40 43
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 4e-37 41
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator AF130997.1.orf0.gene Protein 3e-36 41
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator VFG1563 Protein 2e-37 41
PM3016_4213 YP_005314138.1 winged helix family two component transcriptional regulator VFG1702 Protein 3e-37 41