Gene Information

Name : PM3016_4104 (PM3016_4104)
Accession : YP_005314035.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4845109 - 4845810 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGATACTGATTATCGAGGATGATCAAAGCATTGCCAATCTGCAGCGGGATTACCTGGAGCTCAGCGGCTATGC
GGTAAGGATTGTAGAGAGCGGAGCGGAGGGTTTGAAGGCACTGAAGGAAGAAGAATTCTCCCTCGTGATTCTGGATATCA
TGCTGCCGGGGATGGACGGCTTCGAGGTGCTCCGGACGATCCGGGAGCAGGAGGAGCTGCCGGTGCTGCTCGTCTCCGCA
CGCTCGGAGGAAATCTACAAAATCAACGGCCTCGGTCTCGGCGCCGACGATTACATCACGAAGCCGTTCAGCTCCGGGGA
GCTGGTCGCCCGGGTGAACGCGCATCTGAACAAGTACGAGCGGATGAAGGAGCGGTTCGGCGGTGCACAGGCGAACACTG
GAACCACGCTTCGGGTCCGGGGTCTCGAGATCCATAAGGATTCCCGGCGGGTGTTCGTGAACGGCAGTGAAGTAGCGATG
GCCCAGAAAGAATTCGAGCTGCTCCTGTTCCTGTTCCAGCACGCCAACCGGGTGTTCGGCAAGGAGGAGCTCTTCGAGCG
GATCTGGGGGATGGATGCGATGGGGGATGCTTCCACCGTCACCGTCCATATTGCGAGAATCCGCGAGAAGATCGAGGACA
CGCCCTCGAAGCCCCAGTACATCGGCACGGTATGGGGAGCCGGGTACCGGTTTATCGTGTGA

Protein sequence : 
MKKILIIEDDQSIANLQRDYLELSGYAVRIVESGAEGLKALKEEEFSLVILDIMLPGMDGFEVLRTIREQEELPVLLVSA
RSEEIYKINGLGLGADDYITKPFSSGELVARVNAHLNKYERMKERFGGAQANTGTTLRVRGLEIHKDSRRVFVNGSEVAM
AQKEFELLLFLFQHANRVFGKEELFERIWGMDAMGDASTVTVHIARIREKIEDTPSKPQYIGTVWGAGYRFIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-32 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4104 YP_005314035.1 two component transcriptional regulator EU250284.1.orf4.gene Protein 1e-39 43
PM3016_4104 YP_005314035.1 two component transcriptional regulator NC_012469.1.7685629. Protein 1e-35 43
PM3016_4104 YP_005314035.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 4e-40 41
PM3016_4104 YP_005314035.1 two component transcriptional regulator AF130997.1.orf0.gene Protein 2e-37 41
PM3016_4104 YP_005314035.1 two component transcriptional regulator AM180355.1.gene1830. Protein 1e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_4104 YP_005314035.1 two component transcriptional regulator VFG1563 Protein 8e-33 41
PM3016_4104 YP_005314035.1 two component transcriptional regulator VFG1702 Protein 2e-32 41