Gene Information

Name : PM3016_370 (PM3016_370)
Accession : YP_005310495.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 439228 - 440532 bp
Length : 1305 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAGAAACCACAATCGCCGTACTCGTCCTCTCGATCTCGTTCGTCGTGATGCTGCTGCTCCGCTTCCCGGTCTCGCT
GACACTGGCGGTCTCGACACTGCTCACCGTCATGTATCTCGAAATTCCGCTCGCGGTCGTAGGCCAGCGGATGATCCAGG
GGATGTCGTCCTACTCGCTGCTCACGATTCCGTTCTTCATCCTTGCGGGGCACATCATGAGCGAGGGCAATCTCGCGCTG
CGGATCGTCAACCTCGCTCAGCTGTTCGTCGGGCGCGTCCGCGGAGGACTCGCGATGGTGAACTCGGTGGCCTGCATGTT
CTTCGGCAATATCTCGGGCTCCGCCGTCGCCGACGTGTCGTCCATCGGATCGGTCATGATCCCCATGATGAAGAAAAAAG
GCTACGACACCGACTACTCCGTCGGCGTCACCGTCTCTTCCGCCATCCAGGGCGTCGTCGTGCCGCCGAGCCACAACCTC
GTGCTGTACTCACTGGCCGCAGGGGGCGGAATCTCGATCACCTCGCTGTTCCTTGCAGGCATCGTGCCGGGGATTATCCT
GTGTCTGTCGCTCATGCTGACGAGCTACGTGTTCGCGGTGAAGCGCGGCTACGCCAAGGGCGACCCGATCGACCGCAAGG
ATGTGCCGAAGATTCTGCTCGACGGCTTCATGTCGATTCTGACGGCTGTCATTATCCTCGGGGGGATTTTCTCCGGCTGG
TTCACGGCTACGGAGTCGGGGGCGCTGGCCTGCCTGTATGCCTTTATCCTGACGTTCGTAATCTACAAGGATATCCCTTA
CAGCCGCATGTGGCTGATTCTGAAGAAAACATTCCGTACCGTCTCCATGGTGCTGTTCCTGATCGCCGCCTCCGACGCGT
TCTCCTGGCTGCTGGCGTTCCTGAAGATTCCGGCGATGGTGACCGACGCGATGATCTCGATCTCGGACTCGCCGTTCGTC
ATACTGCTCATCATCAACCTGCTGCTGCTGCTGCTCGGGGCGCCGATGGATATGGCCCCGCTCATTCTGATCATGACGCC
GATCCTGCTGCCCGTCGTAACCCATCTGGGGATGGACCCCGTGCACTTCGGCATCATCATGATGCTCAACCTCGGGATCG
GGCTGCTGACGCCGCCGGTGGGCACCGTCCTCTTCGTCGGCTGTGCGATAGGCAAGATCTCGATCAGCGAAGGAACGAAG
GCCATGATGCCGTTCTTCTACGTGCTATGCGTCGTGCTGCTGGTGCTTACCTACCTGCCGGGACTTGTGATGTGGCTGCC
GAATCTGGTGCAGGGCACCGGATAG

Protein sequence : 
MEETTIAVLVLSISFVVMLLLRFPVSLTLAVSTLLTVMYLEIPLAVVGQRMIQGMSSYSLLTIPFFILAGHIMSEGNLAL
RIVNLAQLFVGRVRGGLAMVNSVACMFFGNISGSAVADVSSIGSVMIPMMKKKGYDTDYSVGVTVSSAIQGVVVPPSHNL
VLYSLAAGGGISITSLFLAGIVPGIILCLSLMLTSYVFAVKRGYAKGDPIDRKDVPKILLDGFMSILTAVIILGGIFSGW
FTATESGALACLYAFILTFVIYKDIPYSRMWLILKKTFRTVSMVLFLIAASDAFSWLLAFLKIPAMVTDAMISISDSPFV
ILLIINLLLLLLGAPMDMAPLILIMTPILLPVVTHLGMDPVHFGIIMMLNLGIGLLTPPVGTVLFVGCAIGKISISEGTK
AMMPFFYVLCVVLLVLTYLPGLVMWLPNLVQGTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-50 41
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-50 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_370 YP_005310495.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 6e-51 41