Gene Information

Name : PM3016_3353 (PM3016_3353)
Accession : YP_005313347.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3836631 - 3837437 bp
Length : 807 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCCGACCCATCTATTCCAAGCCGAACAAACCGTTGCCGGATATGAGAACAAAACGGTTGTTCAGGGAGTAAGCCT
TGTTATCCCAAGTCATAAAATCAGCGTGATGATCGGGGCCAACGCCTGCGGAAAATCTACACTTCTAAAAACACTGGCAA
GGCTGATCAAACCTACATCCGGAAAAATCACCCTTGACGGAAAGCCCATCGAGACAATCCCGCCAAAACAACTGGCTCGG
ATAGTAGGACTGCTGCCTCAATCCCCCATTGTCCCTGAAGGAATTACTGTTGCAGATCTGGTTGGGCGAGGAAGATTTCC
GCACCAATCCTGGTTCGGCGGCTGGAGCAAAAAGGACTATGAGGCCGTTGCCGAAGCGATGGAAATCATGAAGATTACAG
AGCTTGCAAATCGCAATATTGACGAGCTTTCAGGCGGCCAAAGACAGCGCGTCTGGATTGCCATGGCACTGGCGCAGCAA
ACCGACATTTTATTTCTCGATGAGCCTACCACCTTCCTGGATATTACCTACCAGGTGGAAATTCTGGACCTGCTCACAGA
CCTGAACCGAAAGCATGGAACGACCATTGTCATGGTTCTTCATGATATCAACTTGTCCGCACGTTATGCAGATCATATCT
TTGCGCTGCGCGAAGGAAAACTAGTGGCAGAGGGCGATCCATCCAAAGTGATTACAAGCACGTTGGTCAAAGACATCTTC
GATTTGGACTGCACCGTCATTAAAGACCCCATCTCGGGTTCCCCGCTAGTGGTACCCATAGGGCGATATCATGTTCATCA
GGAATGA

Protein sequence : 
MKPTHLFQAEQTVAGYENKTVVQGVSLVIPSHKISVMIGANACGKSTLLKTLARLIKPTSGKITLDGKPIETIPPKQLAR
IVGLLPQSPIVPEGITVADLVGRGRFPHQSWFGGWSKKDYEAVAEAMEIMKITELANRNIDELSGGQRQRVWIAMALAQQ
TDILFLDEPTTFLDITYQVEILDLLTDLNRKHGTTIVMVLHDINLSARYADHIFALREGKLVAEGDPSKVITSTLVKDIF
DLDCTVIKDPISGSPLVVPIGRYHVHQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-76 58
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-76 58
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-70 53
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-51 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-53 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-53 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-53 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-53 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_3353 YP_005313347.1 iron ABC transporter ATP-binding protein BAC0164 Protein 5e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_3353 YP_005313347.1 iron ABC transporter ATP-binding protein VFG0925 Protein 2e-68 51
PM3016_3353 YP_005313347.1 iron ABC transporter ATP-binding protein VFG1042 Protein 5e-53 42