Gene Information

Name : PM3016_2985 (PM3016_2985)
Accession : YP_005313002.1
Strain : Paenibacillus mucilaginosus 3016
Genome accession: NC_016935
Putative virulence/resistance : Virulence
Product : ResD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3426208 - 3426924 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGGAAGTGAAAATGAATATCCTGGTCGTGGACGATGAGGAGCGGATCCGCCGGCTTCTTCGCATGTATCTGGAAAA
GGAGAACTACCGAATCGACGAGGCGGAGGACGGGGAGTCGGCGCTGGCCAAAGCGCTCGAGACCGATTACGATCTCATCC
TCCTCGATGTCATGCTGCCCGGCATTGACGGCAATGAGGTATGCGCCCGGCTGCGCCAGGTCAAGTCGACCCCGGTGATC
ATGCTGACGGCCCGCGGGGAAGAGACGAACCGCGTGCAGGGCTTCGAATCCGGCGCCGACGATTACGTCGTCAAGCCGTT
CTCCCCGCGTGAGGTCATCTACCGGGTCAAGGCGATCCTGCGCCGTTCCTCGGTGACGGCTTACCTGTCGAAGGAAGTGA
ACTCCTCGAACAACATCGTCTTCCCGAACCTCGTCATCGAGCATGACGCCCACCGGGTAACGGCCGGAGGGCAGGAGGTT
GCCTTGACGCCGAAGGAGTACGAGCTGCTGCATTATCTCGCGGTTTCGCCGGATAAGGTGTTCTCCCGCGAAGAGCTGCT
GAAGGACGTATGGAACTACGAGTTCTTCGGCGATCTGCGGACGGTGGACACCCATGTCAAGCGGCTGAGAGAGAAGCTCA
ACAAGGTATCGCCGGAAGCCGCATCGATGATCACCACCGTGTGGGGCGTCGGCTACAAGCTCGAGGTGCCGAAATAA

Protein sequence : 
MSEVKMNILVVDDEERIRRLLRMYLEKENYRIDEAEDGESALAKALETDYDLILLDVMLPGIDGNEVCARLRQVKSTPVI
MLTARGEETNRVQGFESGADDYVVKPFSPREVIYRVKAILRRSSVTAYLSKEVNSSNNIVFPNLVIEHDAHRVTAGGQEV
ALTPKEYELLHYLAVSPDKVFSREELLKDVWNYEFFGDLRTVDTHVKRLREKLNKVSPEAASMITTVWGVGYKLEVPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-36 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_2985 YP_005313002.1 ResD NC_002952.2859905.p0 Protein 1e-44 48
PM3016_2985 YP_005313002.1 ResD NC_002951.3237708.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_003923.1003749.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_002758.1121668.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_009641.5332272.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_013450.8614421.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_007793.3914279.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_007622.3794472.p0 Protein 1e-44 48
PM3016_2985 YP_005313002.1 ResD NC_002745.1124361.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD NC_009782.5559369.p0 Protein 2e-44 48
PM3016_2985 YP_005313002.1 ResD HE999704.1.gene2815. Protein 1e-44 46
PM3016_2985 YP_005313002.1 ResD NC_012469.1.7685629. Protein 1e-38 45
PM3016_2985 YP_005313002.1 ResD NC_003923.1003417.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_013450.8614146.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_002951.3238224.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_007793.3914065.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_002758.1121390.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_010079.5776364.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_002952.2859858.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_007622.3794948.p0 Protein 2e-40 43
PM3016_2985 YP_005313002.1 ResD NC_012469.1.7686381. Protein 6e-41 43
PM3016_2985 YP_005313002.1 ResD AE016830.1.gene1681. Protein 5e-44 43
PM3016_2985 YP_005313002.1 ResD DQ212986.1.gene4.p01 Protein 4e-38 43
PM3016_2985 YP_005313002.1 ResD AE015929.1.gene1106. Protein 2e-35 42
PM3016_2985 YP_005313002.1 ResD CP000034.1.gene2186. Protein 4e-35 42
PM3016_2985 YP_005313002.1 ResD NC_002695.1.916589.p Protein 4e-35 42
PM3016_2985 YP_005313002.1 ResD CP001138.1.gene2239. Protein 5e-36 42
PM3016_2985 YP_005313002.1 ResD BAC0039 Protein 4e-35 42
PM3016_2985 YP_005313002.1 ResD BAC0596 Protein 5e-36 42
PM3016_2985 YP_005313002.1 ResD BAC0197 Protein 4e-34 41
PM3016_2985 YP_005313002.1 ResD CP001485.1.gene721.p Protein 3e-30 41
PM3016_2985 YP_005313002.1 ResD CP000647.1.gene2531. Protein 3e-34 41
PM3016_2985 YP_005313002.1 ResD NC_009085.4919120.p0 Protein 4e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PM3016_2985 YP_005313002.1 ResD VFG1563 Protein 1e-36 42
PM3016_2985 YP_005313002.1 ResD VFG1702 Protein 2e-36 41