Gene Information

Name : fagD (Cp316_0036)
Accession : YP_005302654.1
Strain : Corynebacterium pseudotuberculosis 316
Genome accession: NC_016932
Putative virulence/resistance : Virulence
Product : Iron siderophore binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 28614 - 29666 bp
Length : 1053 bp
Strand : +
Note : -

DNA sequence :
GTGAAAGACACTCAATCTCTGAATACATGGAGCCACCGCATTGCTGTGATGCTGGCTCTTTTCCTTTCAATTTCCCTCAT
CTTTTCATTGGCCGCATGCTCATCCGAAGAAAAACAATCCAAGGATGCTGGGCAAGGTAATGCTGACGTAGCCACCGGTG
GTGCACACTTCTCCACGGCTGATGCAGAAACTGCAAAGCTCGGTAGCGACGCAGCTCCAGGTGAATTCCCTCGTACTGTT
AAGCACGCTTTGGGTGAGACCGAGATCAAGGAACAGCCTAAACGTGTGGTTGTTTTGGATACCGGTGAACTAGACAGCGT
CCTTTCCCTAGGGATCACCCCTGTGGGAATGGTGACTACTAAGGGCTCAAATCCTGTTCCAAGTTATCTTGCAGACAAAG
TAAAAGACGTTAAAAGCGTAGGAACGATCAACGAGATCAACGTAGAAGAGATTGCTGCTTTGCAGCCTGATCTGATCCTG
GGCAGTAAACTGCGCGCAGACAAAATTTACGCTCAGCTCGCAGAAGTCGCACCAACTGTCTTCTCCATCCGTCCTGGATT
CCCTTGGAAAGAAAACTTCCTTCTCATTGGAGATGCTCTAGGTAAAGAGAAAGAAGCAGAGGCAAAGCTGAACGAGTACA
CCGAAAAGGTTGAGACCATCAAGGCCTCCGTGCCAGCAGATACCACGGTCTCCCTTCTTCGTTTCATGCCTAAGCGTATT
CGCCTTTATGGCAACAAGTCTCTCCTCGGTGTGATTCTTAAAGACGCAGGCCTTGCCCGCCCGGAGAATCAGAACATTGA
TGAGCTGGCTACTGAAATCTCCTCTGAGACTATCGACCAGGCAGAGGGAAGCGTGATCTTCTACAGTAGCTACGGCAAGC
CTGATGCGACCGGCCAAGATGCCATTGTCAATGGCGCTGCGTGGAAGAACCTTAACGCGGTGAAGAATGGTCAGGCGCAT
GAGGTTAATGACGACGTATGGTTCCTAGGCCTTGGGCCCACCGGTGCTATGCAGATCGTGGAAGAACTCAAAGAACTGCT
CCCCAAGAAGTAG

Protein sequence :
MKDTQSLNTWSHRIAVMLALFLSISLIFSLAACSSEEKQSKDAGQGNADVATGGAHFSTADAETAKLGSDAAPGEFPRTV
KHALGETEIKEQPKRVVVLDTGELDSVLSLGITPVGMVTTKGSNPVPSYLADKVKDVKSVGTINEINVEEIAALQPDLIL
GSKLRADKIYAQLAEVAPTVFSIRPGFPWKENFLLIGDALGKEKEAEAKLNEYTEKVETIKASVPADTTVSLLRFMPKRI
RLYGNKSLLGVILKDAGLARPENQNIDELATEISSETIDQAEGSVIFYSSYGKPDATGQDAIVNGAAWKNLNAVKNGQAH
EVNDDVWFLGLGPTGAMQIVEELKELLPKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 5e-149 99
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-149 99
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-149 99
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 2e-143 99