Gene Information

Name : potC (Cp316_0194)
Accession : YP_005302808.1
Strain : Corynebacterium pseudotuberculosis 316
Genome accession: NC_016932
Putative virulence/resistance : Unknown
Product : Spermidine/putrescine transport system permease PotC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190238 - 191791 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGAGGACTGGGTTGTGGATTTTTTCGGTAGCGGTGATAGCCGCTGTTGCCGTGGGCATCCCCTATGCCATGATGTTCAG
TACAGCCGATATGAATGTAGTAGCAGTACACTCCATCGTATTAAGCAGCAGCATTGCATTGTGCACAACTATATTTGCAC
TGTGCATTGGCACGTTGGGAGCGTTGGCAGCAGCACAGTTTTCTCGCGCCTCCGTGGTGCTCCTAGACGTCATCTTGTTA
TTCCAGCTCACTATCCCGCATTTTGTTATTGGCGCTGGCTGGAAGACTATTGTGGGCTGCACCGGCATTCAGCTCTGTTC
ACAATGCAATTTTTCGGGCCTTATGCCGCTGTTGTTCACTTTTACGATGGCTTTTACTCCGTTGGTGTACTTCGGACAAC
GCACTGCACTGCGTTCGGTATCTCCCCGCGAGGTTGATGCGGCTCGGGTGGCTGGCCTTCACGGCTGGGCATTGTTCCGC
ACGGTATACCAACCGCGTTTGGTGTTGTTTGCTCCGGCCCTCGGTGCGTTTATTTTCAGTGCGGCATTGTCCGATCCTGT
CACCCCGAATGTGATGGCGCCGCGGGCCTCCTTGGCGGCAACGCGAGTGTGGTTCCAGAGCGATCAGGCGTGGACGGCGT
TGGCGCTCACTCTACCGGTAGCGCTTGCAGTAGTTGTGGCAGGACTAACGTATATGCGTTTGTTGCGCGGTAACCCGGCA
TTGGTTGAGTTACTTCACCGCACTATCGATACCCCTGGTCAGCCGCATCATGCCGTAGGTGCACAGGTGCGTGCACCACA
AACGGTACTGCGTCTATTGGGCGCGGTGGCGGGGTTATTTGTAGTGGTCGCGGCTTATCGCGGGTTTGTGCACGGTTCAG
AGACGCCTATGGGTAATGCAGTGGTGAACACGGTGGGCTTGGCGTTTTTAGTGTTGCTGTGTTCCTTGTTGTTGTCGGCG
GTTGCATTGGGGGCACGGCGTTCATGCGGCCTACGGTGGGGACGGTTGGGTCATCGTAGTATCGACGCGGTGTTTGCGTT
GTTAGCATTGCTGCCGGGAGCTGCGATTGGTTGCGGCCTGCGGATTACTGCGCATCATCCGGGAGTGCATGGGCCGTGGG
CGTCGTTAAGCCTGGTGTTGCTGGCGTGTCTGCCAACTTCGCTGGCTATGACGTATTTTTTGATGGTCTATATTGGGCCA
TTGATGTCGCGTTCGGAGTATATGGTGTCCTTATTGCAAGGCGTTAGCCCGCTGCGCGCGGTGGCGTCGATTGTGTTGCC
GCGCTCAACAAATGTGGTCATTTTGGGCTTTTTGATGGTCTTTTCTAATGCGTCGGTGCTGGCGATGCCATTGTTGTGGG
TCGGTTCGCCCGGTACTCCCCTTCTTATGCTGCGACTTTTCACGCTTCTCGACGCCGCCAACTACCCCGCAGCGCTCTAC
ATCAGCATGACTGTCTCTCTTTTTATCGTGTCCCTTGCCGGGGCTATCGTTGTGAGCATTAATGGCGTGGGTCTCGGTGC
CTTCGCTAGGAAACAGGTAACACCATGGCGTTAG

Protein sequence :
MRTGLWIFSVAVIAAVAVGIPYAMMFSTADMNVVAVHSIVLSSSIALCTTIFALCIGTLGALAAAQFSRASVVLLDVILL
FQLTIPHFVIGAGWKTIVGCTGIQLCSQCNFSGLMPLLFTFTMAFTPLVYFGQRTALRSVSPREVDAARVAGLHGWALFR
TVYQPRLVLFAPALGAFIFSAALSDPVTPNVMAPRASLAATRVWFQSDQAWTALALTLPVALAVVVAGLTYMRLLRGNPA
LVELLHRTIDTPGQPHHAVGAQVRAPQTVLRLLGAVAGLFVVVAAYRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGRLGHRSIDAVFALLALLPGAAIGCGLRITAHHPGVHGPWASLSLVLLACLPTSLAMTYFLMVYIGP
LMSRSEYMVSLLQGVSPLRAVASIVLPRSTNVVILGFLMVFSNASVLAMPLLWVGSPGTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLGAFARKQVTPWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_00180 YP_003782580.1 hypothetical protein Not tested PiCp 3 Protein 0.0 99
potC YP_005682547.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 2e-164 99
potC YP_005684638.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 2e-164 99
potC YP_005680456.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 0.0 99
CDB402_0206 YP_005126719.1 ABC transporter permease protein Not tested Not named Protein 4e-160 87